Cargando…
Usefulness of Vaccine Adverse Event Reporting System for Machine-Learning Based Vaccine Research: A Case Study for COVID-19 Vaccines
Usefulness of Vaccine-Adverse Event-Reporting System (VAERS) data and protocols required for statistical analyses were pinpointed with a set of recommendations for the application of machine learning modeling or exploratory analyses on VAERS data with a case study of COVID-19 vaccines (Pfizer-BioNTe...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9368306/ https://www.ncbi.nlm.nih.gov/pubmed/35897804 http://dx.doi.org/10.3390/ijms23158235 |
_version_ | 1784766085343477760 |
---|---|
author | Flora, James Khan, Wasiq Jin, Jennifer Jin, Daniel Hussain, Abir Dajani, Khalil Khan, Bilal |
author_facet | Flora, James Khan, Wasiq Jin, Jennifer Jin, Daniel Hussain, Abir Dajani, Khalil Khan, Bilal |
author_sort | Flora, James |
collection | PubMed |
description | Usefulness of Vaccine-Adverse Event-Reporting System (VAERS) data and protocols required for statistical analyses were pinpointed with a set of recommendations for the application of machine learning modeling or exploratory analyses on VAERS data with a case study of COVID-19 vaccines (Pfizer-BioNTech, Moderna, Janssen). A total of 262,454 duplicate reports (29%) from 905,976 reports were identified, which were merged into a total of 643,522 distinct reports. A customized online survey was also conducted providing 211 reports. A total of 20 highest reported adverse events were first identified. Differences in results after applying various machine learning algorithms (association rule mining, self-organizing maps, hierarchical clustering, bipartite graphs) on VAERS data were noticed. Moderna reports showed injection-site-related AEs of higher frequencies by 15.2%, consistent with the online survey (12% higher reporting rate for pain in the muscle for Moderna compared to Pfizer-BioNTech). AEs {headache, pyrexia, fatigue, chills, pain, dizziness} constituted >50% of the total reports. Chest pain in male children reports was 295% higher than in female children reports. Penicillin and sulfa were of the highest frequencies (22%, and 19%, respectively). Analysis of uncleaned VAERS data demonstrated major differences from the above (7% variations). Spelling/grammatical mistakes in allergies were discovered (e.g., ~14% reports with incorrect spellings for penicillin). |
format | Online Article Text |
id | pubmed-9368306 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93683062022-08-12 Usefulness of Vaccine Adverse Event Reporting System for Machine-Learning Based Vaccine Research: A Case Study for COVID-19 Vaccines Flora, James Khan, Wasiq Jin, Jennifer Jin, Daniel Hussain, Abir Dajani, Khalil Khan, Bilal Int J Mol Sci Article Usefulness of Vaccine-Adverse Event-Reporting System (VAERS) data and protocols required for statistical analyses were pinpointed with a set of recommendations for the application of machine learning modeling or exploratory analyses on VAERS data with a case study of COVID-19 vaccines (Pfizer-BioNTech, Moderna, Janssen). A total of 262,454 duplicate reports (29%) from 905,976 reports were identified, which were merged into a total of 643,522 distinct reports. A customized online survey was also conducted providing 211 reports. A total of 20 highest reported adverse events were first identified. Differences in results after applying various machine learning algorithms (association rule mining, self-organizing maps, hierarchical clustering, bipartite graphs) on VAERS data were noticed. Moderna reports showed injection-site-related AEs of higher frequencies by 15.2%, consistent with the online survey (12% higher reporting rate for pain in the muscle for Moderna compared to Pfizer-BioNTech). AEs {headache, pyrexia, fatigue, chills, pain, dizziness} constituted >50% of the total reports. Chest pain in male children reports was 295% higher than in female children reports. Penicillin and sulfa were of the highest frequencies (22%, and 19%, respectively). Analysis of uncleaned VAERS data demonstrated major differences from the above (7% variations). Spelling/grammatical mistakes in allergies were discovered (e.g., ~14% reports with incorrect spellings for penicillin). MDPI 2022-07-26 /pmc/articles/PMC9368306/ /pubmed/35897804 http://dx.doi.org/10.3390/ijms23158235 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Flora, James Khan, Wasiq Jin, Jennifer Jin, Daniel Hussain, Abir Dajani, Khalil Khan, Bilal Usefulness of Vaccine Adverse Event Reporting System for Machine-Learning Based Vaccine Research: A Case Study for COVID-19 Vaccines |
title | Usefulness of Vaccine Adverse Event Reporting System for Machine-Learning Based Vaccine Research: A Case Study for COVID-19 Vaccines |
title_full | Usefulness of Vaccine Adverse Event Reporting System for Machine-Learning Based Vaccine Research: A Case Study for COVID-19 Vaccines |
title_fullStr | Usefulness of Vaccine Adverse Event Reporting System for Machine-Learning Based Vaccine Research: A Case Study for COVID-19 Vaccines |
title_full_unstemmed | Usefulness of Vaccine Adverse Event Reporting System for Machine-Learning Based Vaccine Research: A Case Study for COVID-19 Vaccines |
title_short | Usefulness of Vaccine Adverse Event Reporting System for Machine-Learning Based Vaccine Research: A Case Study for COVID-19 Vaccines |
title_sort | usefulness of vaccine adverse event reporting system for machine-learning based vaccine research: a case study for covid-19 vaccines |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9368306/ https://www.ncbi.nlm.nih.gov/pubmed/35897804 http://dx.doi.org/10.3390/ijms23158235 |
work_keys_str_mv | AT florajames usefulnessofvaccineadverseeventreportingsystemformachinelearningbasedvaccineresearchacasestudyforcovid19vaccines AT khanwasiq usefulnessofvaccineadverseeventreportingsystemformachinelearningbasedvaccineresearchacasestudyforcovid19vaccines AT jinjennifer usefulnessofvaccineadverseeventreportingsystemformachinelearningbasedvaccineresearchacasestudyforcovid19vaccines AT jindaniel usefulnessofvaccineadverseeventreportingsystemformachinelearningbasedvaccineresearchacasestudyforcovid19vaccines AT hussainabir usefulnessofvaccineadverseeventreportingsystemformachinelearningbasedvaccineresearchacasestudyforcovid19vaccines AT dajanikhalil usefulnessofvaccineadverseeventreportingsystemformachinelearningbasedvaccineresearchacasestudyforcovid19vaccines AT khanbilal usefulnessofvaccineadverseeventreportingsystemformachinelearningbasedvaccineresearchacasestudyforcovid19vaccines |