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Objective Evaluation of Clinical Actionability for Genes Involved in Myopathies: 63 Genes with a Medical Value for Patient Care

The implementation of high-throughput diagnostic sequencing has led to the generation of large amounts of mutational data, making their interpretation more complex and responsible for long delays. It has been important to prioritize certain analyses, particularly those of “actionable” genes in diagn...

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Autores principales: Vecten, Maude, Pion, Emmanuelle, Bartoli, Marc, Morales, Raul Juntas, Sternberg, Damien, Rendu, John, Stojkovic, Tanya, Bourdain, Cécile Acquaviva, Métay, Corinne, Richard, Isabelle, Cerino, Mathieu, Milh, Mathieu, Campana-Salort, Emmanuelle, Gorokhova, Svetlana, Levy, Nicolas, Latypova, Xénia, Bonne, Gisèle, Biancalana, Valérie, Petit, François, Molon, Annamaria, Perrin, Aurélien, Laforêt, Pascal, Attarian, Shahram, Krahn, Martin, Cossée, Mireille
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9369031/
https://www.ncbi.nlm.nih.gov/pubmed/35955641
http://dx.doi.org/10.3390/ijms23158506
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author Vecten, Maude
Pion, Emmanuelle
Bartoli, Marc
Morales, Raul Juntas
Sternberg, Damien
Rendu, John
Stojkovic, Tanya
Bourdain, Cécile Acquaviva
Métay, Corinne
Richard, Isabelle
Cerino, Mathieu
Milh, Mathieu
Campana-Salort, Emmanuelle
Gorokhova, Svetlana
Levy, Nicolas
Latypova, Xénia
Bonne, Gisèle
Biancalana, Valérie
Petit, François
Molon, Annamaria
Perrin, Aurélien
Laforêt, Pascal
Attarian, Shahram
Krahn, Martin
Cossée, Mireille
author_facet Vecten, Maude
Pion, Emmanuelle
Bartoli, Marc
Morales, Raul Juntas
Sternberg, Damien
Rendu, John
Stojkovic, Tanya
Bourdain, Cécile Acquaviva
Métay, Corinne
Richard, Isabelle
Cerino, Mathieu
Milh, Mathieu
Campana-Salort, Emmanuelle
Gorokhova, Svetlana
Levy, Nicolas
Latypova, Xénia
Bonne, Gisèle
Biancalana, Valérie
Petit, François
Molon, Annamaria
Perrin, Aurélien
Laforêt, Pascal
Attarian, Shahram
Krahn, Martin
Cossée, Mireille
author_sort Vecten, Maude
collection PubMed
description The implementation of high-throughput diagnostic sequencing has led to the generation of large amounts of mutational data, making their interpretation more complex and responsible for long delays. It has been important to prioritize certain analyses, particularly those of “actionable” genes in diagnostic situations, involving specific treatment and/or management. In our project, we carried out an objective assessment of the clinical actionability of genes involved in myopathies, for which only few data obtained methodologically exist to date. Using the ClinGen Actionability criteria, we scored the clinical actionability of all 199 genes implicated in myopathies published by FILNEMUS for the “National French consensus on gene Lists for the diagnosis of myopathies using next generation sequencing”. We objectified that 63 myopathy genes were actionable with the currently available data. Among the 36 myopathy genes with the highest actionability scores, only 8 had been scored to date by ClinGen. The data obtained through these methodological tools are an important resource for strategic choices in diagnostic approaches and the management of genetic myopathies. The clinical actionability of genes has to be considered as an evolving concept, in relation to progresses in disease knowledge and therapeutic approaches.
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spelling pubmed-93690312022-08-12 Objective Evaluation of Clinical Actionability for Genes Involved in Myopathies: 63 Genes with a Medical Value for Patient Care Vecten, Maude Pion, Emmanuelle Bartoli, Marc Morales, Raul Juntas Sternberg, Damien Rendu, John Stojkovic, Tanya Bourdain, Cécile Acquaviva Métay, Corinne Richard, Isabelle Cerino, Mathieu Milh, Mathieu Campana-Salort, Emmanuelle Gorokhova, Svetlana Levy, Nicolas Latypova, Xénia Bonne, Gisèle Biancalana, Valérie Petit, François Molon, Annamaria Perrin, Aurélien Laforêt, Pascal Attarian, Shahram Krahn, Martin Cossée, Mireille Int J Mol Sci Article The implementation of high-throughput diagnostic sequencing has led to the generation of large amounts of mutational data, making their interpretation more complex and responsible for long delays. It has been important to prioritize certain analyses, particularly those of “actionable” genes in diagnostic situations, involving specific treatment and/or management. In our project, we carried out an objective assessment of the clinical actionability of genes involved in myopathies, for which only few data obtained methodologically exist to date. Using the ClinGen Actionability criteria, we scored the clinical actionability of all 199 genes implicated in myopathies published by FILNEMUS for the “National French consensus on gene Lists for the diagnosis of myopathies using next generation sequencing”. We objectified that 63 myopathy genes were actionable with the currently available data. Among the 36 myopathy genes with the highest actionability scores, only 8 had been scored to date by ClinGen. The data obtained through these methodological tools are an important resource for strategic choices in diagnostic approaches and the management of genetic myopathies. The clinical actionability of genes has to be considered as an evolving concept, in relation to progresses in disease knowledge and therapeutic approaches. MDPI 2022-07-31 /pmc/articles/PMC9369031/ /pubmed/35955641 http://dx.doi.org/10.3390/ijms23158506 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Vecten, Maude
Pion, Emmanuelle
Bartoli, Marc
Morales, Raul Juntas
Sternberg, Damien
Rendu, John
Stojkovic, Tanya
Bourdain, Cécile Acquaviva
Métay, Corinne
Richard, Isabelle
Cerino, Mathieu
Milh, Mathieu
Campana-Salort, Emmanuelle
Gorokhova, Svetlana
Levy, Nicolas
Latypova, Xénia
Bonne, Gisèle
Biancalana, Valérie
Petit, François
Molon, Annamaria
Perrin, Aurélien
Laforêt, Pascal
Attarian, Shahram
Krahn, Martin
Cossée, Mireille
Objective Evaluation of Clinical Actionability for Genes Involved in Myopathies: 63 Genes with a Medical Value for Patient Care
title Objective Evaluation of Clinical Actionability for Genes Involved in Myopathies: 63 Genes with a Medical Value for Patient Care
title_full Objective Evaluation of Clinical Actionability for Genes Involved in Myopathies: 63 Genes with a Medical Value for Patient Care
title_fullStr Objective Evaluation of Clinical Actionability for Genes Involved in Myopathies: 63 Genes with a Medical Value for Patient Care
title_full_unstemmed Objective Evaluation of Clinical Actionability for Genes Involved in Myopathies: 63 Genes with a Medical Value for Patient Care
title_short Objective Evaluation of Clinical Actionability for Genes Involved in Myopathies: 63 Genes with a Medical Value for Patient Care
title_sort objective evaluation of clinical actionability for genes involved in myopathies: 63 genes with a medical value for patient care
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9369031/
https://www.ncbi.nlm.nih.gov/pubmed/35955641
http://dx.doi.org/10.3390/ijms23158506
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