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Distribution and Climatic Adaptation of Wild Tomato (Solanum lycopersicum L.) Populations in Mexico

Tomato (Solanum lycopersicum L.) is a vegetable with worldwide importance. Its wild or close related species are reservoirs of genes with potential use for the generation of varieties tolerant or resistant to specific biotic and abiotic factors. The objective was to determine the geographic distribu...

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Autores principales: Ramírez-Ojeda, Gabriela, Rodríguez-Pérez, Juan Enrique, Rodríguez-Guzmán, Eduardo, Sahagún-Castellanos, Jaime, Chávez-Servia, José Luis, Peralta, Iris E., Barrera-Guzmán, Luis Ángel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9370545/
https://www.ncbi.nlm.nih.gov/pubmed/35956486
http://dx.doi.org/10.3390/plants11152007
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author Ramírez-Ojeda, Gabriela
Rodríguez-Pérez, Juan Enrique
Rodríguez-Guzmán, Eduardo
Sahagún-Castellanos, Jaime
Chávez-Servia, José Luis
Peralta, Iris E.
Barrera-Guzmán, Luis Ángel
author_facet Ramírez-Ojeda, Gabriela
Rodríguez-Pérez, Juan Enrique
Rodríguez-Guzmán, Eduardo
Sahagún-Castellanos, Jaime
Chávez-Servia, José Luis
Peralta, Iris E.
Barrera-Guzmán, Luis Ángel
author_sort Ramírez-Ojeda, Gabriela
collection PubMed
description Tomato (Solanum lycopersicum L.) is a vegetable with worldwide importance. Its wild or close related species are reservoirs of genes with potential use for the generation of varieties tolerant or resistant to specific biotic and abiotic factors. The objective was to determine the geographic distribution, ecological descriptors, and patterns of diversity and adaptation of 1296 accessions of native tomato from Mexico. An environmental information system was created with 21 climatic variables with a 1 km(2) spatial resolution. Using multivariate techniques (Principal Component Analysis, PCA; Cluster Analysis, CA) and Geographic Information Systems (GIS), the most relevant variables for accession distribution were identified, as well as the groups formed according to the environmental similarity among these. PCA determined that with the first three PCs (Principal Components), it is possible to explain 84.1% of the total variation. The most relevant information corresponded to seasonal variables of temperature and precipitation. CA revealed five statistically significant clusters. Ecological descriptors were determined and described by classifying accessions in Physiographic Provinces. Temperate climates were the most frequent among tomato accessions. Finally, the potential distribution was determined with the Maxent model with 10 replicates by cross-validation, identifying areas with a high probability of tomato presence. These results constitute a reliable source of useful information for planning accession sites collection and identifying accessions that are vulnerable or susceptible to conservation programs.
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spelling pubmed-93705452022-08-12 Distribution and Climatic Adaptation of Wild Tomato (Solanum lycopersicum L.) Populations in Mexico Ramírez-Ojeda, Gabriela Rodríguez-Pérez, Juan Enrique Rodríguez-Guzmán, Eduardo Sahagún-Castellanos, Jaime Chávez-Servia, José Luis Peralta, Iris E. Barrera-Guzmán, Luis Ángel Plants (Basel) Article Tomato (Solanum lycopersicum L.) is a vegetable with worldwide importance. Its wild or close related species are reservoirs of genes with potential use for the generation of varieties tolerant or resistant to specific biotic and abiotic factors. The objective was to determine the geographic distribution, ecological descriptors, and patterns of diversity and adaptation of 1296 accessions of native tomato from Mexico. An environmental information system was created with 21 climatic variables with a 1 km(2) spatial resolution. Using multivariate techniques (Principal Component Analysis, PCA; Cluster Analysis, CA) and Geographic Information Systems (GIS), the most relevant variables for accession distribution were identified, as well as the groups formed according to the environmental similarity among these. PCA determined that with the first three PCs (Principal Components), it is possible to explain 84.1% of the total variation. The most relevant information corresponded to seasonal variables of temperature and precipitation. CA revealed five statistically significant clusters. Ecological descriptors were determined and described by classifying accessions in Physiographic Provinces. Temperate climates were the most frequent among tomato accessions. Finally, the potential distribution was determined with the Maxent model with 10 replicates by cross-validation, identifying areas with a high probability of tomato presence. These results constitute a reliable source of useful information for planning accession sites collection and identifying accessions that are vulnerable or susceptible to conservation programs. MDPI 2022-08-01 /pmc/articles/PMC9370545/ /pubmed/35956486 http://dx.doi.org/10.3390/plants11152007 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ramírez-Ojeda, Gabriela
Rodríguez-Pérez, Juan Enrique
Rodríguez-Guzmán, Eduardo
Sahagún-Castellanos, Jaime
Chávez-Servia, José Luis
Peralta, Iris E.
Barrera-Guzmán, Luis Ángel
Distribution and Climatic Adaptation of Wild Tomato (Solanum lycopersicum L.) Populations in Mexico
title Distribution and Climatic Adaptation of Wild Tomato (Solanum lycopersicum L.) Populations in Mexico
title_full Distribution and Climatic Adaptation of Wild Tomato (Solanum lycopersicum L.) Populations in Mexico
title_fullStr Distribution and Climatic Adaptation of Wild Tomato (Solanum lycopersicum L.) Populations in Mexico
title_full_unstemmed Distribution and Climatic Adaptation of Wild Tomato (Solanum lycopersicum L.) Populations in Mexico
title_short Distribution and Climatic Adaptation of Wild Tomato (Solanum lycopersicum L.) Populations in Mexico
title_sort distribution and climatic adaptation of wild tomato (solanum lycopersicum l.) populations in mexico
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9370545/
https://www.ncbi.nlm.nih.gov/pubmed/35956486
http://dx.doi.org/10.3390/plants11152007
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