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Quantifying the Variation in the Geometries of the Outer Rims of Corolla Tubes of Vinca major L.
Many geometries of plant organs can be described by the Gielis equation, a polar coordinate equation extended from the superellipse equation, [Formula: see text]. Here, r is the polar radius corresponding to the polar angle φ; m is a positive integer that determines the number of angles of the Gieli...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9370681/ https://www.ncbi.nlm.nih.gov/pubmed/35956465 http://dx.doi.org/10.3390/plants11151987 |
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author | Wang, Lin Miao, Qinyue Niinemets, Ülo Gielis, Johan Shi, Peijian |
author_facet | Wang, Lin Miao, Qinyue Niinemets, Ülo Gielis, Johan Shi, Peijian |
author_sort | Wang, Lin |
collection | PubMed |
description | Many geometries of plant organs can be described by the Gielis equation, a polar coordinate equation extended from the superellipse equation, [Formula: see text]. Here, r is the polar radius corresponding to the polar angle φ; m is a positive integer that determines the number of angles of the Gielis curve when φ ∈ [0 to 2π); and the rest of the symbols are parameters to be estimated. The pentagonal radial symmetry of calyxes and corolla tubes in top view is a common feature in the flowers of many eudicots. However, prior studies have not tested whether the Gielis equation can depict the shapes of corolla tubes. We sampled randomly 366 flowers of Vinca major L., among which 360 had five petals and pentagonal corolla tubes, and six had four petals and quadrangular corolla tubes. We extracted the planar coordinates of the outer rims of corolla tubes (in top view) (ORCTs), and then fitted the data with two simplified versions of the Gielis equation with k = 1 and m = 5: [Formula: see text] (Model 1), and [Formula: see text] (Model 2). The adjusted root mean square error (RMSE(adj)) was used to evaluate the goodness of fit of each model. In addition, to test whether ORCTs are radially symmetrical, we correlated the estimates of n(2) and n(3) in Model 1 on a log-log scale. The results validated the two simplified Gielis equations. The RMSE(adj) values for all corolla tubes were smaller than 0.05 for both models. The numerical values of n(2) and n(3) were demonstrated to be statistically equal based on the regression analysis, which suggested that the ORCTs of V. major are radially symmetrical. It suggests that Model 1 can be replaced by the simpler Model 2 for fitting the ORCT in this species. This work indicates that the pentagonal or quadrangular corolla tubes (in top view) can both be modeled by the Gielis equation and demonstrates that the pentagonal or quadrangular corolla tubes of plants tend to form radial symmetrical geometries during their development and growth. |
format | Online Article Text |
id | pubmed-9370681 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93706812022-08-12 Quantifying the Variation in the Geometries of the Outer Rims of Corolla Tubes of Vinca major L. Wang, Lin Miao, Qinyue Niinemets, Ülo Gielis, Johan Shi, Peijian Plants (Basel) Article Many geometries of plant organs can be described by the Gielis equation, a polar coordinate equation extended from the superellipse equation, [Formula: see text]. Here, r is the polar radius corresponding to the polar angle φ; m is a positive integer that determines the number of angles of the Gielis curve when φ ∈ [0 to 2π); and the rest of the symbols are parameters to be estimated. The pentagonal radial symmetry of calyxes and corolla tubes in top view is a common feature in the flowers of many eudicots. However, prior studies have not tested whether the Gielis equation can depict the shapes of corolla tubes. We sampled randomly 366 flowers of Vinca major L., among which 360 had five petals and pentagonal corolla tubes, and six had four petals and quadrangular corolla tubes. We extracted the planar coordinates of the outer rims of corolla tubes (in top view) (ORCTs), and then fitted the data with two simplified versions of the Gielis equation with k = 1 and m = 5: [Formula: see text] (Model 1), and [Formula: see text] (Model 2). The adjusted root mean square error (RMSE(adj)) was used to evaluate the goodness of fit of each model. In addition, to test whether ORCTs are radially symmetrical, we correlated the estimates of n(2) and n(3) in Model 1 on a log-log scale. The results validated the two simplified Gielis equations. The RMSE(adj) values for all corolla tubes were smaller than 0.05 for both models. The numerical values of n(2) and n(3) were demonstrated to be statistically equal based on the regression analysis, which suggested that the ORCTs of V. major are radially symmetrical. It suggests that Model 1 can be replaced by the simpler Model 2 for fitting the ORCT in this species. This work indicates that the pentagonal or quadrangular corolla tubes (in top view) can both be modeled by the Gielis equation and demonstrates that the pentagonal or quadrangular corolla tubes of plants tend to form radial symmetrical geometries during their development and growth. MDPI 2022-07-30 /pmc/articles/PMC9370681/ /pubmed/35956465 http://dx.doi.org/10.3390/plants11151987 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Wang, Lin Miao, Qinyue Niinemets, Ülo Gielis, Johan Shi, Peijian Quantifying the Variation in the Geometries of the Outer Rims of Corolla Tubes of Vinca major L. |
title | Quantifying the Variation in the Geometries of the Outer Rims of Corolla Tubes of Vinca major L. |
title_full | Quantifying the Variation in the Geometries of the Outer Rims of Corolla Tubes of Vinca major L. |
title_fullStr | Quantifying the Variation in the Geometries of the Outer Rims of Corolla Tubes of Vinca major L. |
title_full_unstemmed | Quantifying the Variation in the Geometries of the Outer Rims of Corolla Tubes of Vinca major L. |
title_short | Quantifying the Variation in the Geometries of the Outer Rims of Corolla Tubes of Vinca major L. |
title_sort | quantifying the variation in the geometries of the outer rims of corolla tubes of vinca major l. |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9370681/ https://www.ncbi.nlm.nih.gov/pubmed/35956465 http://dx.doi.org/10.3390/plants11151987 |
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