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Predicting demographic characteristics from anterior segment OCT images with deep learning: A study protocol

INTRODUCTION: Anterior segment optical coherence tomography (AS-OCT) is a non-contact, rapid, and high-resolution in vivo modality for imaging of the eyeball’s anterior segment structures. Because progressive anterior segment deformation is a hallmark of certain eye diseases such as angle-closure gl...

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Autores principales: Lee, Yun Jeong, Sun, Sukkyu, Kim, Young Kook
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9371292/
https://www.ncbi.nlm.nih.gov/pubmed/35951641
http://dx.doi.org/10.1371/journal.pone.0270493
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author Lee, Yun Jeong
Sun, Sukkyu
Kim, Young Kook
author_facet Lee, Yun Jeong
Sun, Sukkyu
Kim, Young Kook
author_sort Lee, Yun Jeong
collection PubMed
description INTRODUCTION: Anterior segment optical coherence tomography (AS-OCT) is a non-contact, rapid, and high-resolution in vivo modality for imaging of the eyeball’s anterior segment structures. Because progressive anterior segment deformation is a hallmark of certain eye diseases such as angle-closure glaucoma, identification of AS-OCT structural changes over time is fundamental to their diagnosis and monitoring. Detection of pathologic damage, however, relies on the ability to differentiate it from normal, age-related structural changes. METHODS AND ANALYSIS: This proposed large-scale, retrospective cross-sectional study will determine whether demographic characteristics including age can be predicted from deep learning analysis of AS-OCT images; it will also assess the importance of specific anterior segment areas of the eyeball to the prediction. We plan to extract, from SUPREME(®), a clinical data warehouse (CDW) of Seoul National University Hospital (SNUH; Seoul, South Korea), a list of patients (at least 2,000) who underwent AS-OCT imaging between 2008 and 2020. AS-OCT images as well as demographic characteristics including age, gender, height, weight and body mass index (BMI) will be collected from electronic medical records (EMRs). The dataset of horizontal AS-OCT images will be split into training (80%), validation (10%), and test (10%) datasets, and a Vision Transformer (ViT) model will be built to predict demographics. Gradient-weighted Class Activation Mapping (Grad-CAM) will be used to visualize the regions of AS-OCT images that contributed to the model’s decisions. The accuracy, sensitivity, specificity, and area under the receiver operating characteristic (ROC) curve (AUC) will be applied to evaluate the model performance. CONCLUSION: This paper presents a study protocol for prediction of demographic characteristics from AS-OCT images of the eyeball using a deep learning model. The results of this study will aid clinicians in understanding and identifying age-related structural changes and other demographics-based structural differences. TRIAL REGISTRATION: Registration ID with open science framework: 10.17605/OSF.IO/FQ46X.
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spelling pubmed-93712922022-08-12 Predicting demographic characteristics from anterior segment OCT images with deep learning: A study protocol Lee, Yun Jeong Sun, Sukkyu Kim, Young Kook PLoS One Study Protocol INTRODUCTION: Anterior segment optical coherence tomography (AS-OCT) is a non-contact, rapid, and high-resolution in vivo modality for imaging of the eyeball’s anterior segment structures. Because progressive anterior segment deformation is a hallmark of certain eye diseases such as angle-closure glaucoma, identification of AS-OCT structural changes over time is fundamental to their diagnosis and monitoring. Detection of pathologic damage, however, relies on the ability to differentiate it from normal, age-related structural changes. METHODS AND ANALYSIS: This proposed large-scale, retrospective cross-sectional study will determine whether demographic characteristics including age can be predicted from deep learning analysis of AS-OCT images; it will also assess the importance of specific anterior segment areas of the eyeball to the prediction. We plan to extract, from SUPREME(®), a clinical data warehouse (CDW) of Seoul National University Hospital (SNUH; Seoul, South Korea), a list of patients (at least 2,000) who underwent AS-OCT imaging between 2008 and 2020. AS-OCT images as well as demographic characteristics including age, gender, height, weight and body mass index (BMI) will be collected from electronic medical records (EMRs). The dataset of horizontal AS-OCT images will be split into training (80%), validation (10%), and test (10%) datasets, and a Vision Transformer (ViT) model will be built to predict demographics. Gradient-weighted Class Activation Mapping (Grad-CAM) will be used to visualize the regions of AS-OCT images that contributed to the model’s decisions. The accuracy, sensitivity, specificity, and area under the receiver operating characteristic (ROC) curve (AUC) will be applied to evaluate the model performance. CONCLUSION: This paper presents a study protocol for prediction of demographic characteristics from AS-OCT images of the eyeball using a deep learning model. The results of this study will aid clinicians in understanding and identifying age-related structural changes and other demographics-based structural differences. TRIAL REGISTRATION: Registration ID with open science framework: 10.17605/OSF.IO/FQ46X. Public Library of Science 2022-08-11 /pmc/articles/PMC9371292/ /pubmed/35951641 http://dx.doi.org/10.1371/journal.pone.0270493 Text en © 2022 Lee et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Study Protocol
Lee, Yun Jeong
Sun, Sukkyu
Kim, Young Kook
Predicting demographic characteristics from anterior segment OCT images with deep learning: A study protocol
title Predicting demographic characteristics from anterior segment OCT images with deep learning: A study protocol
title_full Predicting demographic characteristics from anterior segment OCT images with deep learning: A study protocol
title_fullStr Predicting demographic characteristics from anterior segment OCT images with deep learning: A study protocol
title_full_unstemmed Predicting demographic characteristics from anterior segment OCT images with deep learning: A study protocol
title_short Predicting demographic characteristics from anterior segment OCT images with deep learning: A study protocol
title_sort predicting demographic characteristics from anterior segment oct images with deep learning: a study protocol
topic Study Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9371292/
https://www.ncbi.nlm.nih.gov/pubmed/35951641
http://dx.doi.org/10.1371/journal.pone.0270493
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