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COVID-19 diagnosis using chest CT scans and deep convolutional neural networks evolved by IP-based sine-cosine algorithm
The prevalence of the COVID-19 virus and its variants has influenced all aspects of our life, and therefore, the precise diagnosis of this disease is vital. If a polymerase chain reaction test for a subject is negative, but he/she cannot easily breathe, taking a computed tomography (CT) image from h...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9374292/ https://www.ncbi.nlm.nih.gov/pubmed/35962266 http://dx.doi.org/10.1007/s11517-022-02637-6 |
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author | Xu, Binfeng Martín, Diego Khishe, Mohammad Boostani, Reza |
author_facet | Xu, Binfeng Martín, Diego Khishe, Mohammad Boostani, Reza |
author_sort | Xu, Binfeng |
collection | PubMed |
description | The prevalence of the COVID-19 virus and its variants has influenced all aspects of our life, and therefore, the precise diagnosis of this disease is vital. If a polymerase chain reaction test for a subject is negative, but he/she cannot easily breathe, taking a computed tomography (CT) image from his/her lung is urgently recommended. This study aims to optimize a deep convolution neural network (DCNN) structure to increase the COVID-19 diagnosis accuracy in lung CT images. This paper employs the sine-cosine algorithm (SCA) to optimize the structure of DCNN to take raw CT images and determine their status. Three improvements based on regular SCA are proposed to enhance both the accuracy and speed of the results. First, a new encoding approach is proposed based on the internet protocol (IP) address. Then, an enfeebled layer is proposed to generate a variable-length DCNN. The suggested model is examined over the COVID-CT and SARS-CoV-2 datasets. The proposed method is compared to a standard DCNN and seven variable-length models in terms of five known metrics, including sensitivity, accuracy, specificity, F1-score, precision, and receiver operative curve (ROC) and precision-recall curves. The results demonstrate that the proposed DCNN-IPSCA surpasses other benchmarks, achieving final accuracy of (98.32% and 98.01%), the sensitivity of (97.22% and 96.23%), and specificity of (96.77% and 96.44%) on the SARS-CoV-2 and COVID-CT datasets, respectively. Also, the proposed DCNN-IPSCA performs much better than the standard DCNN, with GPU and CPU training times, which are 387.69 and 63.10 times faster, respectively. GRAPHICAL ABSTRACT: [Image: see text] |
format | Online Article Text |
id | pubmed-9374292 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-93742922022-08-12 COVID-19 diagnosis using chest CT scans and deep convolutional neural networks evolved by IP-based sine-cosine algorithm Xu, Binfeng Martín, Diego Khishe, Mohammad Boostani, Reza Med Biol Eng Comput Original Article The prevalence of the COVID-19 virus and its variants has influenced all aspects of our life, and therefore, the precise diagnosis of this disease is vital. If a polymerase chain reaction test for a subject is negative, but he/she cannot easily breathe, taking a computed tomography (CT) image from his/her lung is urgently recommended. This study aims to optimize a deep convolution neural network (DCNN) structure to increase the COVID-19 diagnosis accuracy in lung CT images. This paper employs the sine-cosine algorithm (SCA) to optimize the structure of DCNN to take raw CT images and determine their status. Three improvements based on regular SCA are proposed to enhance both the accuracy and speed of the results. First, a new encoding approach is proposed based on the internet protocol (IP) address. Then, an enfeebled layer is proposed to generate a variable-length DCNN. The suggested model is examined over the COVID-CT and SARS-CoV-2 datasets. The proposed method is compared to a standard DCNN and seven variable-length models in terms of five known metrics, including sensitivity, accuracy, specificity, F1-score, precision, and receiver operative curve (ROC) and precision-recall curves. The results demonstrate that the proposed DCNN-IPSCA surpasses other benchmarks, achieving final accuracy of (98.32% and 98.01%), the sensitivity of (97.22% and 96.23%), and specificity of (96.77% and 96.44%) on the SARS-CoV-2 and COVID-CT datasets, respectively. Also, the proposed DCNN-IPSCA performs much better than the standard DCNN, with GPU and CPU training times, which are 387.69 and 63.10 times faster, respectively. GRAPHICAL ABSTRACT: [Image: see text] Springer Berlin Heidelberg 2022-08-12 2022 /pmc/articles/PMC9374292/ /pubmed/35962266 http://dx.doi.org/10.1007/s11517-022-02637-6 Text en © International Federation for Medical and Biological Engineering 2022, Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Article Xu, Binfeng Martín, Diego Khishe, Mohammad Boostani, Reza COVID-19 diagnosis using chest CT scans and deep convolutional neural networks evolved by IP-based sine-cosine algorithm |
title | COVID-19 diagnosis using chest CT scans and deep convolutional neural networks evolved by IP-based sine-cosine algorithm |
title_full | COVID-19 diagnosis using chest CT scans and deep convolutional neural networks evolved by IP-based sine-cosine algorithm |
title_fullStr | COVID-19 diagnosis using chest CT scans and deep convolutional neural networks evolved by IP-based sine-cosine algorithm |
title_full_unstemmed | COVID-19 diagnosis using chest CT scans and deep convolutional neural networks evolved by IP-based sine-cosine algorithm |
title_short | COVID-19 diagnosis using chest CT scans and deep convolutional neural networks evolved by IP-based sine-cosine algorithm |
title_sort | covid-19 diagnosis using chest ct scans and deep convolutional neural networks evolved by ip-based sine-cosine algorithm |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9374292/ https://www.ncbi.nlm.nih.gov/pubmed/35962266 http://dx.doi.org/10.1007/s11517-022-02637-6 |
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