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ProbResist: a database for drug-resistant probiotic bacteria

Drug resistance remains a global threat, and the rising trend of consuming probiotic-containing foods, many of which harbor antibiotic resistant determinants, has raised serious health concerns. Currently, the lack of accessibility to location-, drug- and species-specific information of drug-resista...

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Autores principales: Dou, Wanying, Abdalla, Hemn Barzan, Chen, Xu, Sun, Changyi, Chen, Xuefei, Tian, Qiwen, Wang, Junyi, Zhou, Wei, Chi, Wei, Zhou, Xuan, Ye, Hailv, Bi, Chuyun, Tian, Xuechen, Yang, Yixin, Wong, Aloysius
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9375527/
https://www.ncbi.nlm.nih.gov/pubmed/35962763
http://dx.doi.org/10.1093/database/baac064
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author Dou, Wanying
Abdalla, Hemn Barzan
Chen, Xu
Sun, Changyi
Chen, Xuefei
Tian, Qiwen
Wang, Junyi
Zhou, Wei
Chi, Wei
Zhou, Xuan
Ye, Hailv
Bi, Chuyun
Tian, Xuechen
Yang, Yixin
Wong, Aloysius
author_facet Dou, Wanying
Abdalla, Hemn Barzan
Chen, Xu
Sun, Changyi
Chen, Xuefei
Tian, Qiwen
Wang, Junyi
Zhou, Wei
Chi, Wei
Zhou, Xuan
Ye, Hailv
Bi, Chuyun
Tian, Xuechen
Yang, Yixin
Wong, Aloysius
author_sort Dou, Wanying
collection PubMed
description Drug resistance remains a global threat, and the rising trend of consuming probiotic-containing foods, many of which harbor antibiotic resistant determinants, has raised serious health concerns. Currently, the lack of accessibility to location-, drug- and species-specific information of drug-resistant probiotics has hampered efforts to combat the global spread of drug resistance. Here, we describe the development of ProbResist, which is a manually curated online database that catalogs reports of probiotic bacteria that have been experimentally proven to be resistant to antibiotics. ProbResist allows users to search for information of drug resistance in probiotics by querying with the names of the bacteria, antibiotic or location. Retrieved results are presented in a downloadable table format containing the names of the antibiotic, probiotic species, resistant determinants, region where the study was conducted and digital article identifiers (PubMed Identifier and Digital Object Identifier) hyperlinked to the original sources. The webserver also presents a simple analysis of information stored in the database. Given the increasing reports of drug-resistant probiotics, an exclusive database is necessary to catalog them in one platform. It will enable medical practitioners and experts involved in policy making to access this information quickly and conveniently, thus contributing toward the broader goal of combating drug resistance. DATABASE URL: https://probresist.com.
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spelling pubmed-93755272022-08-15 ProbResist: a database for drug-resistant probiotic bacteria Dou, Wanying Abdalla, Hemn Barzan Chen, Xu Sun, Changyi Chen, Xuefei Tian, Qiwen Wang, Junyi Zhou, Wei Chi, Wei Zhou, Xuan Ye, Hailv Bi, Chuyun Tian, Xuechen Yang, Yixin Wong, Aloysius Database (Oxford) Database Tool Drug resistance remains a global threat, and the rising trend of consuming probiotic-containing foods, many of which harbor antibiotic resistant determinants, has raised serious health concerns. Currently, the lack of accessibility to location-, drug- and species-specific information of drug-resistant probiotics has hampered efforts to combat the global spread of drug resistance. Here, we describe the development of ProbResist, which is a manually curated online database that catalogs reports of probiotic bacteria that have been experimentally proven to be resistant to antibiotics. ProbResist allows users to search for information of drug resistance in probiotics by querying with the names of the bacteria, antibiotic or location. Retrieved results are presented in a downloadable table format containing the names of the antibiotic, probiotic species, resistant determinants, region where the study was conducted and digital article identifiers (PubMed Identifier and Digital Object Identifier) hyperlinked to the original sources. The webserver also presents a simple analysis of information stored in the database. Given the increasing reports of drug-resistant probiotics, an exclusive database is necessary to catalog them in one platform. It will enable medical practitioners and experts involved in policy making to access this information quickly and conveniently, thus contributing toward the broader goal of combating drug resistance. DATABASE URL: https://probresist.com. Oxford University Press 2022-08-13 /pmc/articles/PMC9375527/ /pubmed/35962763 http://dx.doi.org/10.1093/database/baac064 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Tool
Dou, Wanying
Abdalla, Hemn Barzan
Chen, Xu
Sun, Changyi
Chen, Xuefei
Tian, Qiwen
Wang, Junyi
Zhou, Wei
Chi, Wei
Zhou, Xuan
Ye, Hailv
Bi, Chuyun
Tian, Xuechen
Yang, Yixin
Wong, Aloysius
ProbResist: a database for drug-resistant probiotic bacteria
title ProbResist: a database for drug-resistant probiotic bacteria
title_full ProbResist: a database for drug-resistant probiotic bacteria
title_fullStr ProbResist: a database for drug-resistant probiotic bacteria
title_full_unstemmed ProbResist: a database for drug-resistant probiotic bacteria
title_short ProbResist: a database for drug-resistant probiotic bacteria
title_sort probresist: a database for drug-resistant probiotic bacteria
topic Database Tool
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9375527/
https://www.ncbi.nlm.nih.gov/pubmed/35962763
http://dx.doi.org/10.1093/database/baac064
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