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RS12574989 and haplotype associated with α/β-chain imbalance and population HbA2 reduction

Determining the associated relationship of genotype and phenomenon would benefit the understanding of disease and renew disease intervention means. 14,518 patients who underwent haemoglobin electrophoresis from June 2020 to December 2020 were enrolled in our study, and additional data including sex,...

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Autores principales: Lin, Qiyin, Xie, Yingjun, Zhong, Xuan, Sun, Xiaofang, Wang, Ding
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9377088/
https://www.ncbi.nlm.nih.gov/pubmed/35971149
http://dx.doi.org/10.1186/s12920-022-01333-6
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author Lin, Qiyin
Xie, Yingjun
Zhong, Xuan
Sun, Xiaofang
Wang, Ding
author_facet Lin, Qiyin
Xie, Yingjun
Zhong, Xuan
Sun, Xiaofang
Wang, Ding
author_sort Lin, Qiyin
collection PubMed
description Determining the associated relationship of genotype and phenomenon would benefit the understanding of disease and renew disease intervention means. 14,518 patients who underwent haemoglobin electrophoresis from June 2020 to December 2020 were enrolled in our study, and additional data including sex, age and routine blood examination results were collected. We focused on individuals with normal red blood cell indices and no common thalassemia pathogenic mutation and selected three groups for the following study: the control group (2.5% ≤ HbA(2) ≤ 3.5%), the HbA(2) under 2.5 group (HbA(2) < 2.5%) and the HbA(2) under 2.4 group (HbA(2) < 2.4%). Four regions of β-globin regulation were sequenced. Statistical analysis was conducted to compare the collected information of the three groups and the genotype distributions in the control group and sequenced group. The HbA(2) under 2.5 group was characterized by a majority of females and lower red blood cell counts and haemoglobin compared with the control group. There were genotypes associated with the grouping as the T of rs12574989 and TTTAGC of the haplotype were significantly increased in the HbA(2) under 2.4 group and CTTAGC was significantly decreased in the HbA(2) under 2.4 group. This study demonstrated that the genotypes of the population associated with HbA(2) were reduced in southern China.
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spelling pubmed-93770882022-08-16 RS12574989 and haplotype associated with α/β-chain imbalance and population HbA2 reduction Lin, Qiyin Xie, Yingjun Zhong, Xuan Sun, Xiaofang Wang, Ding BMC Med Genomics Research Determining the associated relationship of genotype and phenomenon would benefit the understanding of disease and renew disease intervention means. 14,518 patients who underwent haemoglobin electrophoresis from June 2020 to December 2020 were enrolled in our study, and additional data including sex, age and routine blood examination results were collected. We focused on individuals with normal red blood cell indices and no common thalassemia pathogenic mutation and selected three groups for the following study: the control group (2.5% ≤ HbA(2) ≤ 3.5%), the HbA(2) under 2.5 group (HbA(2) < 2.5%) and the HbA(2) under 2.4 group (HbA(2) < 2.4%). Four regions of β-globin regulation were sequenced. Statistical analysis was conducted to compare the collected information of the three groups and the genotype distributions in the control group and sequenced group. The HbA(2) under 2.5 group was characterized by a majority of females and lower red blood cell counts and haemoglobin compared with the control group. There were genotypes associated with the grouping as the T of rs12574989 and TTTAGC of the haplotype were significantly increased in the HbA(2) under 2.4 group and CTTAGC was significantly decreased in the HbA(2) under 2.4 group. This study demonstrated that the genotypes of the population associated with HbA(2) were reduced in southern China. BioMed Central 2022-08-15 /pmc/articles/PMC9377088/ /pubmed/35971149 http://dx.doi.org/10.1186/s12920-022-01333-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Lin, Qiyin
Xie, Yingjun
Zhong, Xuan
Sun, Xiaofang
Wang, Ding
RS12574989 and haplotype associated with α/β-chain imbalance and population HbA2 reduction
title RS12574989 and haplotype associated with α/β-chain imbalance and population HbA2 reduction
title_full RS12574989 and haplotype associated with α/β-chain imbalance and population HbA2 reduction
title_fullStr RS12574989 and haplotype associated with α/β-chain imbalance and population HbA2 reduction
title_full_unstemmed RS12574989 and haplotype associated with α/β-chain imbalance and population HbA2 reduction
title_short RS12574989 and haplotype associated with α/β-chain imbalance and population HbA2 reduction
title_sort rs12574989 and haplotype associated with α/β-chain imbalance and population hba2 reduction
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9377088/
https://www.ncbi.nlm.nih.gov/pubmed/35971149
http://dx.doi.org/10.1186/s12920-022-01333-6
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