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Life barcoded by DNA barcodes
The modern concept of DNA-based barcoding for cataloguing biodiversity was proposed in 2003 by first adopting an approximately 600 bp fragment of the mitochondrial COI gene to compare via nucleotide alignments with known sequences from specimens previously identified by taxonomists. Other standardiz...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9377290/ https://www.ncbi.nlm.nih.gov/pubmed/35991367 http://dx.doi.org/10.1007/s12686-022-01291-2 |
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author | Guo, Mali Yuan, Chaohai Tao, Leyan Cai, Yafei Zhang, Wei |
author_facet | Guo, Mali Yuan, Chaohai Tao, Leyan Cai, Yafei Zhang, Wei |
author_sort | Guo, Mali |
collection | PubMed |
description | The modern concept of DNA-based barcoding for cataloguing biodiversity was proposed in 2003 by first adopting an approximately 600 bp fragment of the mitochondrial COI gene to compare via nucleotide alignments with known sequences from specimens previously identified by taxonomists. Other standardized regions meeting barcoding criteria then are also evolving as DNA barcodes for fast, reliable and inexpensive assessment of species composition across all forms of life, including animals, plants, fungi, bacteria and other microorganisms. Consequently, global DNA barcoding campaigns have resulted in the formation of many online workbenches and databases, such as BOLD system, as barcode references, and facilitated the development of mini-barcodes and metabarcoding strategies as important extensions of barcode techniques. Here we intend to give an overview of the characteristics and features of these barcode markers and major reference libraries existing for barcoding the planet’s life, as well as to address the limitations and opportunities of DNA barcodes to an increasingly broader community of science and society. |
format | Online Article Text |
id | pubmed-9377290 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-93772902022-08-15 Life barcoded by DNA barcodes Guo, Mali Yuan, Chaohai Tao, Leyan Cai, Yafei Zhang, Wei Conserv Genet Resour Technical Notes The modern concept of DNA-based barcoding for cataloguing biodiversity was proposed in 2003 by first adopting an approximately 600 bp fragment of the mitochondrial COI gene to compare via nucleotide alignments with known sequences from specimens previously identified by taxonomists. Other standardized regions meeting barcoding criteria then are also evolving as DNA barcodes for fast, reliable and inexpensive assessment of species composition across all forms of life, including animals, plants, fungi, bacteria and other microorganisms. Consequently, global DNA barcoding campaigns have resulted in the formation of many online workbenches and databases, such as BOLD system, as barcode references, and facilitated the development of mini-barcodes and metabarcoding strategies as important extensions of barcode techniques. Here we intend to give an overview of the characteristics and features of these barcode markers and major reference libraries existing for barcoding the planet’s life, as well as to address the limitations and opportunities of DNA barcodes to an increasingly broader community of science and society. Springer Netherlands 2022-08-15 2022 /pmc/articles/PMC9377290/ /pubmed/35991367 http://dx.doi.org/10.1007/s12686-022-01291-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Technical Notes Guo, Mali Yuan, Chaohai Tao, Leyan Cai, Yafei Zhang, Wei Life barcoded by DNA barcodes |
title | Life barcoded by DNA barcodes |
title_full | Life barcoded by DNA barcodes |
title_fullStr | Life barcoded by DNA barcodes |
title_full_unstemmed | Life barcoded by DNA barcodes |
title_short | Life barcoded by DNA barcodes |
title_sort | life barcoded by dna barcodes |
topic | Technical Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9377290/ https://www.ncbi.nlm.nih.gov/pubmed/35991367 http://dx.doi.org/10.1007/s12686-022-01291-2 |
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