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Draft Genomes of Six Wild Poisonous Mushrooms

Foodborne illnesses caused by wild mushroom poisoning occur globally and have led to food safety concerns. Here, we reported de novo genome assemblies of the six most commonly encountered toxic mushrooms in Thailand. These comprised Amanita brunneitoxicaria, Cantharocybe virosa, Chlorophyllum molybd...

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Autores principales: Parnmen, Sittiporn, Nooron, Nattakarn, Sikaphan, Sujitra, Uttawichai, Chutimon, Polputpisatkul, Dutsadee, Phatsarapongkul, Sriprapa, Chankunasuka, Rungsaeng, Nitma, Unchalee, Thunkhamrak, Chidkamon, Palakul, Nisakorn, Naksuwankul, Khwanruan, Pringsulaka, Onanong, Rangsiruji, Achariya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9379371/
https://www.ncbi.nlm.nih.gov/pubmed/35979510
http://dx.doi.org/10.7150/jgen.75652
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author Parnmen, Sittiporn
Nooron, Nattakarn
Sikaphan, Sujitra
Uttawichai, Chutimon
Polputpisatkul, Dutsadee
Phatsarapongkul, Sriprapa
Chankunasuka, Rungsaeng
Nitma, Unchalee
Thunkhamrak, Chidkamon
Palakul, Nisakorn
Naksuwankul, Khwanruan
Pringsulaka, Onanong
Rangsiruji, Achariya
author_facet Parnmen, Sittiporn
Nooron, Nattakarn
Sikaphan, Sujitra
Uttawichai, Chutimon
Polputpisatkul, Dutsadee
Phatsarapongkul, Sriprapa
Chankunasuka, Rungsaeng
Nitma, Unchalee
Thunkhamrak, Chidkamon
Palakul, Nisakorn
Naksuwankul, Khwanruan
Pringsulaka, Onanong
Rangsiruji, Achariya
author_sort Parnmen, Sittiporn
collection PubMed
description Foodborne illnesses caused by wild mushroom poisoning occur globally and have led to food safety concerns. Here, we reported de novo genome assemblies of the six most commonly encountered toxic mushrooms in Thailand. These comprised Amanita brunneitoxicaria, Cantharocybe virosa, Chlorophyllum molybdites, Entoloma mastoideum, Pseudosperma sp. and Russula subnigricans. The nuclear genome sizes of these species ranged from 40 to 77 Mb, with the number of predicted genes ranging from 5,375 to 14,099. The mitogenome sizes varied from 41,555 to 78,907 bp. The resulting draft genomes of these poisonous mushrooms provide insights into toxin-related genes that may be used to establish genetic markers for monitoring mushroom poisoning outbreaks.
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spelling pubmed-93793712022-08-16 Draft Genomes of Six Wild Poisonous Mushrooms Parnmen, Sittiporn Nooron, Nattakarn Sikaphan, Sujitra Uttawichai, Chutimon Polputpisatkul, Dutsadee Phatsarapongkul, Sriprapa Chankunasuka, Rungsaeng Nitma, Unchalee Thunkhamrak, Chidkamon Palakul, Nisakorn Naksuwankul, Khwanruan Pringsulaka, Onanong Rangsiruji, Achariya J Genomics Research Paper Foodborne illnesses caused by wild mushroom poisoning occur globally and have led to food safety concerns. Here, we reported de novo genome assemblies of the six most commonly encountered toxic mushrooms in Thailand. These comprised Amanita brunneitoxicaria, Cantharocybe virosa, Chlorophyllum molybdites, Entoloma mastoideum, Pseudosperma sp. and Russula subnigricans. The nuclear genome sizes of these species ranged from 40 to 77 Mb, with the number of predicted genes ranging from 5,375 to 14,099. The mitogenome sizes varied from 41,555 to 78,907 bp. The resulting draft genomes of these poisonous mushrooms provide insights into toxin-related genes that may be used to establish genetic markers for monitoring mushroom poisoning outbreaks. Ivyspring International Publisher 2022-08-01 /pmc/articles/PMC9379371/ /pubmed/35979510 http://dx.doi.org/10.7150/jgen.75652 Text en © The author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Parnmen, Sittiporn
Nooron, Nattakarn
Sikaphan, Sujitra
Uttawichai, Chutimon
Polputpisatkul, Dutsadee
Phatsarapongkul, Sriprapa
Chankunasuka, Rungsaeng
Nitma, Unchalee
Thunkhamrak, Chidkamon
Palakul, Nisakorn
Naksuwankul, Khwanruan
Pringsulaka, Onanong
Rangsiruji, Achariya
Draft Genomes of Six Wild Poisonous Mushrooms
title Draft Genomes of Six Wild Poisonous Mushrooms
title_full Draft Genomes of Six Wild Poisonous Mushrooms
title_fullStr Draft Genomes of Six Wild Poisonous Mushrooms
title_full_unstemmed Draft Genomes of Six Wild Poisonous Mushrooms
title_short Draft Genomes of Six Wild Poisonous Mushrooms
title_sort draft genomes of six wild poisonous mushrooms
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9379371/
https://www.ncbi.nlm.nih.gov/pubmed/35979510
http://dx.doi.org/10.7150/jgen.75652
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