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Draft Genomes of Six Wild Poisonous Mushrooms
Foodborne illnesses caused by wild mushroom poisoning occur globally and have led to food safety concerns. Here, we reported de novo genome assemblies of the six most commonly encountered toxic mushrooms in Thailand. These comprised Amanita brunneitoxicaria, Cantharocybe virosa, Chlorophyllum molybd...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Ivyspring International Publisher
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9379371/ https://www.ncbi.nlm.nih.gov/pubmed/35979510 http://dx.doi.org/10.7150/jgen.75652 |
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author | Parnmen, Sittiporn Nooron, Nattakarn Sikaphan, Sujitra Uttawichai, Chutimon Polputpisatkul, Dutsadee Phatsarapongkul, Sriprapa Chankunasuka, Rungsaeng Nitma, Unchalee Thunkhamrak, Chidkamon Palakul, Nisakorn Naksuwankul, Khwanruan Pringsulaka, Onanong Rangsiruji, Achariya |
author_facet | Parnmen, Sittiporn Nooron, Nattakarn Sikaphan, Sujitra Uttawichai, Chutimon Polputpisatkul, Dutsadee Phatsarapongkul, Sriprapa Chankunasuka, Rungsaeng Nitma, Unchalee Thunkhamrak, Chidkamon Palakul, Nisakorn Naksuwankul, Khwanruan Pringsulaka, Onanong Rangsiruji, Achariya |
author_sort | Parnmen, Sittiporn |
collection | PubMed |
description | Foodborne illnesses caused by wild mushroom poisoning occur globally and have led to food safety concerns. Here, we reported de novo genome assemblies of the six most commonly encountered toxic mushrooms in Thailand. These comprised Amanita brunneitoxicaria, Cantharocybe virosa, Chlorophyllum molybdites, Entoloma mastoideum, Pseudosperma sp. and Russula subnigricans. The nuclear genome sizes of these species ranged from 40 to 77 Mb, with the number of predicted genes ranging from 5,375 to 14,099. The mitogenome sizes varied from 41,555 to 78,907 bp. The resulting draft genomes of these poisonous mushrooms provide insights into toxin-related genes that may be used to establish genetic markers for monitoring mushroom poisoning outbreaks. |
format | Online Article Text |
id | pubmed-9379371 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-93793712022-08-16 Draft Genomes of Six Wild Poisonous Mushrooms Parnmen, Sittiporn Nooron, Nattakarn Sikaphan, Sujitra Uttawichai, Chutimon Polputpisatkul, Dutsadee Phatsarapongkul, Sriprapa Chankunasuka, Rungsaeng Nitma, Unchalee Thunkhamrak, Chidkamon Palakul, Nisakorn Naksuwankul, Khwanruan Pringsulaka, Onanong Rangsiruji, Achariya J Genomics Research Paper Foodborne illnesses caused by wild mushroom poisoning occur globally and have led to food safety concerns. Here, we reported de novo genome assemblies of the six most commonly encountered toxic mushrooms in Thailand. These comprised Amanita brunneitoxicaria, Cantharocybe virosa, Chlorophyllum molybdites, Entoloma mastoideum, Pseudosperma sp. and Russula subnigricans. The nuclear genome sizes of these species ranged from 40 to 77 Mb, with the number of predicted genes ranging from 5,375 to 14,099. The mitogenome sizes varied from 41,555 to 78,907 bp. The resulting draft genomes of these poisonous mushrooms provide insights into toxin-related genes that may be used to establish genetic markers for monitoring mushroom poisoning outbreaks. Ivyspring International Publisher 2022-08-01 /pmc/articles/PMC9379371/ /pubmed/35979510 http://dx.doi.org/10.7150/jgen.75652 Text en © The author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Parnmen, Sittiporn Nooron, Nattakarn Sikaphan, Sujitra Uttawichai, Chutimon Polputpisatkul, Dutsadee Phatsarapongkul, Sriprapa Chankunasuka, Rungsaeng Nitma, Unchalee Thunkhamrak, Chidkamon Palakul, Nisakorn Naksuwankul, Khwanruan Pringsulaka, Onanong Rangsiruji, Achariya Draft Genomes of Six Wild Poisonous Mushrooms |
title | Draft Genomes of Six Wild Poisonous Mushrooms |
title_full | Draft Genomes of Six Wild Poisonous Mushrooms |
title_fullStr | Draft Genomes of Six Wild Poisonous Mushrooms |
title_full_unstemmed | Draft Genomes of Six Wild Poisonous Mushrooms |
title_short | Draft Genomes of Six Wild Poisonous Mushrooms |
title_sort | draft genomes of six wild poisonous mushrooms |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9379371/ https://www.ncbi.nlm.nih.gov/pubmed/35979510 http://dx.doi.org/10.7150/jgen.75652 |
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