Cargando…

Identification of Cytosolic DNA Sensor cGAS-STING as Immune-Related Risk Factor in Renal Carcinoma following Pan-Cancer Analysis

BACKGROUND: The cytosolic DNA sensor cyclic GMP-AMP synthase (cGAS) plays critical functions in innate immune responses via the production of the second messenger cyclic guanosine monophosphate-adenosine monophosphate (cGAMP), which stimulates the adaptor stimulator of interferon genes (STING). Howe...

Descripción completa

Detalles Bibliográficos
Autores principales: Wu, Zheng, Lin, Ying, Liu, Li-Min, Hou, Yan-Li, Qin, Wei-Ting, Zhang, Lei, Jiang, Shu-Heng, Yang, Qin, Bai, Yong-Rui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9381291/
https://www.ncbi.nlm.nih.gov/pubmed/35983076
http://dx.doi.org/10.1155/2022/7978042
_version_ 1784769047446945792
author Wu, Zheng
Lin, Ying
Liu, Li-Min
Hou, Yan-Li
Qin, Wei-Ting
Zhang, Lei
Jiang, Shu-Heng
Yang, Qin
Bai, Yong-Rui
author_facet Wu, Zheng
Lin, Ying
Liu, Li-Min
Hou, Yan-Li
Qin, Wei-Ting
Zhang, Lei
Jiang, Shu-Heng
Yang, Qin
Bai, Yong-Rui
author_sort Wu, Zheng
collection PubMed
description BACKGROUND: The cytosolic DNA sensor cyclic GMP-AMP synthase (cGAS) plays critical functions in innate immune responses via the production of the second messenger cyclic guanosine monophosphate-adenosine monophosphate (cGAMP), which stimulates the adaptor stimulator of interferon genes (STING). However, the clinical relevance and prognostic value of the cGAS-STING pathway in human cancers remains largely unexplored. METHODS: A gene signature related to the cGAS-STING score was identified. The pan-cancer landscape of cGAS-STING expression was calculated using the RNAseq data acquired from the TCGA cohort. Tumor-infiltrating immune cells (TIICs) were determined by the ssGSEA method. Kaplan–Meier curves, Cox regression analyses, and the area under the curve (AUC) were employed to decipher the predictive value of cGAS-STING risk score and TIICs across several human cancers. RESULTS: Most tumor tissues displayed a higher cGAS-STING score compared with their corresponding nontumor tissues, except for prostate adenocarcinoma (PRAD) and uterine corpus endometrial carcinoma (UCEC). Higher cGAS-STING score was closely associated with poor clinical outcome of kidney renal clear cell carcinoma (KIRC) and kidney renal papillary cell carcinoma (KIRP), whereas the cGAS-STING score predicted a better prognosis in pheochromocytoma and paraganglioma (PCPG). Enrichment analysis showed that cGAS-STING was profoundly implicated in diverse immune-related pathways in KIRC, KIRP, and PCPG. Significant positive correlations were noticed between cGAS-STING score and TIICs, including activated CD8+ T cells, activated CD4+ T cells, monocytes, and mast cells. Finally, the cGAS-STING score was revealed to be an independent prognostic factor for KIRC patients and possessed a strong predictive power for the prognostic evaluation of KIRC and KIRP patients. CONCLUSIONS: We constructed a cGAS-STING gene signature to predict survival and tumor immunity across human cancers, which can serve as a novel prognostic indicator and therapeutic target, especially in KIRC and KIRP.
format Online
Article
Text
id pubmed-9381291
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-93812912022-08-17 Identification of Cytosolic DNA Sensor cGAS-STING as Immune-Related Risk Factor in Renal Carcinoma following Pan-Cancer Analysis Wu, Zheng Lin, Ying Liu, Li-Min Hou, Yan-Li Qin, Wei-Ting Zhang, Lei Jiang, Shu-Heng Yang, Qin Bai, Yong-Rui J Immunol Res Research Article BACKGROUND: The cytosolic DNA sensor cyclic GMP-AMP synthase (cGAS) plays critical functions in innate immune responses via the production of the second messenger cyclic guanosine monophosphate-adenosine monophosphate (cGAMP), which stimulates the adaptor stimulator of interferon genes (STING). However, the clinical relevance and prognostic value of the cGAS-STING pathway in human cancers remains largely unexplored. METHODS: A gene signature related to the cGAS-STING score was identified. The pan-cancer landscape of cGAS-STING expression was calculated using the RNAseq data acquired from the TCGA cohort. Tumor-infiltrating immune cells (TIICs) were determined by the ssGSEA method. Kaplan–Meier curves, Cox regression analyses, and the area under the curve (AUC) were employed to decipher the predictive value of cGAS-STING risk score and TIICs across several human cancers. RESULTS: Most tumor tissues displayed a higher cGAS-STING score compared with their corresponding nontumor tissues, except for prostate adenocarcinoma (PRAD) and uterine corpus endometrial carcinoma (UCEC). Higher cGAS-STING score was closely associated with poor clinical outcome of kidney renal clear cell carcinoma (KIRC) and kidney renal papillary cell carcinoma (KIRP), whereas the cGAS-STING score predicted a better prognosis in pheochromocytoma and paraganglioma (PCPG). Enrichment analysis showed that cGAS-STING was profoundly implicated in diverse immune-related pathways in KIRC, KIRP, and PCPG. Significant positive correlations were noticed between cGAS-STING score and TIICs, including activated CD8+ T cells, activated CD4+ T cells, monocytes, and mast cells. Finally, the cGAS-STING score was revealed to be an independent prognostic factor for KIRC patients and possessed a strong predictive power for the prognostic evaluation of KIRC and KIRP patients. CONCLUSIONS: We constructed a cGAS-STING gene signature to predict survival and tumor immunity across human cancers, which can serve as a novel prognostic indicator and therapeutic target, especially in KIRC and KIRP. Hindawi 2022-08-09 /pmc/articles/PMC9381291/ /pubmed/35983076 http://dx.doi.org/10.1155/2022/7978042 Text en Copyright © 2022 Zheng Wu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Wu, Zheng
Lin, Ying
Liu, Li-Min
Hou, Yan-Li
Qin, Wei-Ting
Zhang, Lei
Jiang, Shu-Heng
Yang, Qin
Bai, Yong-Rui
Identification of Cytosolic DNA Sensor cGAS-STING as Immune-Related Risk Factor in Renal Carcinoma following Pan-Cancer Analysis
title Identification of Cytosolic DNA Sensor cGAS-STING as Immune-Related Risk Factor in Renal Carcinoma following Pan-Cancer Analysis
title_full Identification of Cytosolic DNA Sensor cGAS-STING as Immune-Related Risk Factor in Renal Carcinoma following Pan-Cancer Analysis
title_fullStr Identification of Cytosolic DNA Sensor cGAS-STING as Immune-Related Risk Factor in Renal Carcinoma following Pan-Cancer Analysis
title_full_unstemmed Identification of Cytosolic DNA Sensor cGAS-STING as Immune-Related Risk Factor in Renal Carcinoma following Pan-Cancer Analysis
title_short Identification of Cytosolic DNA Sensor cGAS-STING as Immune-Related Risk Factor in Renal Carcinoma following Pan-Cancer Analysis
title_sort identification of cytosolic dna sensor cgas-sting as immune-related risk factor in renal carcinoma following pan-cancer analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9381291/
https://www.ncbi.nlm.nih.gov/pubmed/35983076
http://dx.doi.org/10.1155/2022/7978042
work_keys_str_mv AT wuzheng identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis
AT linying identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis
AT liulimin identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis
AT houyanli identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis
AT qinweiting identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis
AT zhanglei identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis
AT jiangshuheng identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis
AT yangqin identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis
AT baiyongrui identificationofcytosolicdnasensorcgasstingasimmunerelatedriskfactorinrenalcarcinomafollowingpancanceranalysis