Cargando…

Elevated expression of LIF predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma

BACKGROUND: Renal cell carcinoma (RCC) is the seventh most common cancer in humans, of which clear cell renal cell carcinoma (ccRCC) accounts for the majority. Recently, although there have been significant breakthroughs in the treatment of ccRCC, the prognosis of targeted therapy is still poor. Leu...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhong, Wenting, Liu, Hongxia, Li, Feng, lin, Youyu, Ye, Yan, Xu, Luyun, Li, ShengZhao, Chen, Hui, Li, Chengcheng, Lin, Yuxuan, Zhuang, Wei, Lin, Yao, Wang, Qingshui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9382297/
https://www.ncbi.nlm.nih.gov/pubmed/35992780
http://dx.doi.org/10.3389/fonc.2022.934128
_version_ 1784769257875177472
author Zhong, Wenting
Liu, Hongxia
Li, Feng
lin, Youyu
Ye, Yan
Xu, Luyun
Li, ShengZhao
Chen, Hui
Li, Chengcheng
Lin, Yuxuan
Zhuang, Wei
Lin, Yao
Wang, Qingshui
author_facet Zhong, Wenting
Liu, Hongxia
Li, Feng
lin, Youyu
Ye, Yan
Xu, Luyun
Li, ShengZhao
Chen, Hui
Li, Chengcheng
Lin, Yuxuan
Zhuang, Wei
Lin, Yao
Wang, Qingshui
author_sort Zhong, Wenting
collection PubMed
description BACKGROUND: Renal cell carcinoma (RCC) is the seventh most common cancer in humans, of which clear cell renal cell carcinoma (ccRCC) accounts for the majority. Recently, although there have been significant breakthroughs in the treatment of ccRCC, the prognosis of targeted therapy is still poor. Leukemia inhibitory factor (LIF) is a pleiotropic protein, which is overexpressed in many cancers and plays a carcinogenic role. In this study, we explored the expression and potential role of LIF in ccRCC. METHODS: The expression levels and prognostic effects of the LIF gene in ccRCC were detected using TCGA, GEO, ICGC, and ArrayExpress databases. The function of LIF in ccRCC was investigated using a series of cell function approaches. LIF-related genes were identified by weighted gene correlation network analysis (WGCNA). GO and KEGG analyses were performed subsequently. Cox univariate and LASSO analyses were used to develop risk signatures based on LIF-related genes, and the prognostic model was validated in the ICGC and E-MTAB-1980 databases. Then, a nomogram model was constructed for survival prediction and validation of ccRCC patients. To further explore the drug sensitivity between LIF-related genes, we also conducted a drug sensitivity analysis based on the GDSC database. RESULTS: The mRNA and protein expression levels of LIF were significantly increased in ccRCC patients. In addition, a high expression of LIF has a poor prognostic effect in ccRCC patients. LIF knockdown can inhibit the migration and invasion of ccRCC cells. By using WGCNA, 97 LIF-related genes in ccRCC were identified. Next, a prognostic risk prediction model including eight LIF-related genes (TOB2, MEPCE, LIF, RGS2, RND3, KLF6, RRP12, and SOCS3) was developed and validated. Survival analysis and ROC curve analysis indicated that the eight LIF-related-gene predictive model had good performance in evaluating patients’ prognosis in different subgroups of ccRCC. CONCLUSION: Our study revealed that LIF plays a carcinogenic role in ccRCC. In addition, we firstly integrated multiple LIF-related genes to set up a risk-predictive model. The model could accurately predict the prognosis of ccRCC, which offers clinical implications for risk stratification, drug screening, and therapeutic decision.
format Online
Article
Text
id pubmed-9382297
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-93822972022-08-18 Elevated expression of LIF predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma Zhong, Wenting Liu, Hongxia Li, Feng lin, Youyu Ye, Yan Xu, Luyun Li, ShengZhao Chen, Hui Li, Chengcheng Lin, Yuxuan Zhuang, Wei Lin, Yao Wang, Qingshui Front Oncol Oncology BACKGROUND: Renal cell carcinoma (RCC) is the seventh most common cancer in humans, of which clear cell renal cell carcinoma (ccRCC) accounts for the majority. Recently, although there have been significant breakthroughs in the treatment of ccRCC, the prognosis of targeted therapy is still poor. Leukemia inhibitory factor (LIF) is a pleiotropic protein, which is overexpressed in many cancers and plays a carcinogenic role. In this study, we explored the expression and potential role of LIF in ccRCC. METHODS: The expression levels and prognostic effects of the LIF gene in ccRCC were detected using TCGA, GEO, ICGC, and ArrayExpress databases. The function of LIF in ccRCC was investigated using a series of cell function approaches. LIF-related genes were identified by weighted gene correlation network analysis (WGCNA). GO and KEGG analyses were performed subsequently. Cox univariate and LASSO analyses were used to develop risk signatures based on LIF-related genes, and the prognostic model was validated in the ICGC and E-MTAB-1980 databases. Then, a nomogram model was constructed for survival prediction and validation of ccRCC patients. To further explore the drug sensitivity between LIF-related genes, we also conducted a drug sensitivity analysis based on the GDSC database. RESULTS: The mRNA and protein expression levels of LIF were significantly increased in ccRCC patients. In addition, a high expression of LIF has a poor prognostic effect in ccRCC patients. LIF knockdown can inhibit the migration and invasion of ccRCC cells. By using WGCNA, 97 LIF-related genes in ccRCC were identified. Next, a prognostic risk prediction model including eight LIF-related genes (TOB2, MEPCE, LIF, RGS2, RND3, KLF6, RRP12, and SOCS3) was developed and validated. Survival analysis and ROC curve analysis indicated that the eight LIF-related-gene predictive model had good performance in evaluating patients’ prognosis in different subgroups of ccRCC. CONCLUSION: Our study revealed that LIF plays a carcinogenic role in ccRCC. In addition, we firstly integrated multiple LIF-related genes to set up a risk-predictive model. The model could accurately predict the prognosis of ccRCC, which offers clinical implications for risk stratification, drug screening, and therapeutic decision. Frontiers Media S.A. 2022-08-03 /pmc/articles/PMC9382297/ /pubmed/35992780 http://dx.doi.org/10.3389/fonc.2022.934128 Text en Copyright © 2022 Zhong, Liu, Li, lin, Ye, Xu, Li, Chen, Li, Lin, Zhuang, Lin and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Zhong, Wenting
Liu, Hongxia
Li, Feng
lin, Youyu
Ye, Yan
Xu, Luyun
Li, ShengZhao
Chen, Hui
Li, Chengcheng
Lin, Yuxuan
Zhuang, Wei
Lin, Yao
Wang, Qingshui
Elevated expression of LIF predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma
title Elevated expression of LIF predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma
title_full Elevated expression of LIF predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma
title_fullStr Elevated expression of LIF predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma
title_full_unstemmed Elevated expression of LIF predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma
title_short Elevated expression of LIF predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma
title_sort elevated expression of lif predicts a poor prognosis and promotes cell migration and invasion of clear cell renal cell carcinoma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9382297/
https://www.ncbi.nlm.nih.gov/pubmed/35992780
http://dx.doi.org/10.3389/fonc.2022.934128
work_keys_str_mv AT zhongwenting elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT liuhongxia elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT lifeng elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT linyouyu elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT yeyan elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT xuluyun elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT lishengzhao elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT chenhui elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT lichengcheng elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT linyuxuan elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT zhuangwei elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT linyao elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma
AT wangqingshui elevatedexpressionoflifpredictsapoorprognosisandpromotescellmigrationandinvasionofclearcellrenalcellcarcinoma