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Uncertainty Estimation in Medical Image Classification: Systematic Review

BACKGROUND: Deep neural networks are showing impressive results in different medical image classification tasks. However, for real-world applications, there is a need to estimate the network’s uncertainty together with its prediction. OBJECTIVE: In this review, we investigate in what form uncertaint...

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Autores principales: Kurz, Alexander, Hauser, Katja, Mehrtens, Hendrik Alexander, Krieghoff-Henning, Eva, Hekler, Achim, Kather, Jakob Nikolas, Fröhling, Stefan, von Kalle, Christof, Brinker, Titus Josef
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9382553/
https://www.ncbi.nlm.nih.gov/pubmed/35916701
http://dx.doi.org/10.2196/36427
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author Kurz, Alexander
Hauser, Katja
Mehrtens, Hendrik Alexander
Krieghoff-Henning, Eva
Hekler, Achim
Kather, Jakob Nikolas
Fröhling, Stefan
von Kalle, Christof
Brinker, Titus Josef
author_facet Kurz, Alexander
Hauser, Katja
Mehrtens, Hendrik Alexander
Krieghoff-Henning, Eva
Hekler, Achim
Kather, Jakob Nikolas
Fröhling, Stefan
von Kalle, Christof
Brinker, Titus Josef
author_sort Kurz, Alexander
collection PubMed
description BACKGROUND: Deep neural networks are showing impressive results in different medical image classification tasks. However, for real-world applications, there is a need to estimate the network’s uncertainty together with its prediction. OBJECTIVE: In this review, we investigate in what form uncertainty estimation has been applied to the task of medical image classification. We also investigate which metrics are used to describe the effectiveness of the applied uncertainty estimation METHODS: Google Scholar, PubMed, IEEE Xplore, and ScienceDirect were screened for peer-reviewed studies, published between 2016 and 2021, that deal with uncertainty estimation in medical image classification. The search terms “uncertainty,” “uncertainty estimation,” “network calibration,” and “out-of-distribution detection” were used in combination with the terms “medical images,” “medical image analysis,” and “medical image classification.” RESULTS: A total of 22 papers were chosen for detailed analysis through the systematic review process. This paper provides a table for a systematic comparison of the included works with respect to the applied method for estimating the uncertainty. CONCLUSIONS: The applied methods for estimating uncertainties are diverse, but the sampling-based methods Monte-Carlo Dropout and Deep Ensembles are used most frequently. We concluded that future works can investigate the benefits of uncertainty estimation in collaborative settings of artificial intelligence systems and human experts. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): RR2-10.2196/11936
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spelling pubmed-93825532022-08-18 Uncertainty Estimation in Medical Image Classification: Systematic Review Kurz, Alexander Hauser, Katja Mehrtens, Hendrik Alexander Krieghoff-Henning, Eva Hekler, Achim Kather, Jakob Nikolas Fröhling, Stefan von Kalle, Christof Brinker, Titus Josef JMIR Med Inform Review BACKGROUND: Deep neural networks are showing impressive results in different medical image classification tasks. However, for real-world applications, there is a need to estimate the network’s uncertainty together with its prediction. OBJECTIVE: In this review, we investigate in what form uncertainty estimation has been applied to the task of medical image classification. We also investigate which metrics are used to describe the effectiveness of the applied uncertainty estimation METHODS: Google Scholar, PubMed, IEEE Xplore, and ScienceDirect were screened for peer-reviewed studies, published between 2016 and 2021, that deal with uncertainty estimation in medical image classification. The search terms “uncertainty,” “uncertainty estimation,” “network calibration,” and “out-of-distribution detection” were used in combination with the terms “medical images,” “medical image analysis,” and “medical image classification.” RESULTS: A total of 22 papers were chosen for detailed analysis through the systematic review process. This paper provides a table for a systematic comparison of the included works with respect to the applied method for estimating the uncertainty. CONCLUSIONS: The applied methods for estimating uncertainties are diverse, but the sampling-based methods Monte-Carlo Dropout and Deep Ensembles are used most frequently. We concluded that future works can investigate the benefits of uncertainty estimation in collaborative settings of artificial intelligence systems and human experts. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): RR2-10.2196/11936 JMIR Publications 2022-08-02 /pmc/articles/PMC9382553/ /pubmed/35916701 http://dx.doi.org/10.2196/36427 Text en ©Alexander Kurz, Katja Hauser, Hendrik Alexander Mehrtens, Eva Krieghoff-Henning, Achim Hekler, Jakob Nikolas Kather, Stefan Fröhling, Christof von Kalle, Titus Josef Brinker. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 02.08.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Review
Kurz, Alexander
Hauser, Katja
Mehrtens, Hendrik Alexander
Krieghoff-Henning, Eva
Hekler, Achim
Kather, Jakob Nikolas
Fröhling, Stefan
von Kalle, Christof
Brinker, Titus Josef
Uncertainty Estimation in Medical Image Classification: Systematic Review
title Uncertainty Estimation in Medical Image Classification: Systematic Review
title_full Uncertainty Estimation in Medical Image Classification: Systematic Review
title_fullStr Uncertainty Estimation in Medical Image Classification: Systematic Review
title_full_unstemmed Uncertainty Estimation in Medical Image Classification: Systematic Review
title_short Uncertainty Estimation in Medical Image Classification: Systematic Review
title_sort uncertainty estimation in medical image classification: systematic review
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9382553/
https://www.ncbi.nlm.nih.gov/pubmed/35916701
http://dx.doi.org/10.2196/36427
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