Cargando…

PROMISE: a real-world clinical-genomic database to address knowledge gaps in prostate cancer

PURPOSE: Prostate cancer is a heterogeneous disease with variable clinical outcomes. Despite numerous recent approvals of novel therapies, castration-resistant prostate cancer remains lethal. A “real-world” clinical-genomic database is urgently needed to enhance our characterization of advanced pros...

Descripción completa

Detalles Bibliográficos
Autores principales: Koshkin, Vadim S., Patel, Vaibhav G., Ali, Alicia, Bilen, Mehmet A., Ravindranathan, Deepak, Park, Joseph J., Kellezi, Olesia, Cieslik, Marcin, Shaya, Justin, Cabal, Angelo, Brown, Landon, Labriola, Matthew, Graham, Laura S., Pritchard, Colin, Tripathi, Abhishek, Nusrat, Sanober, Barata, Pedro, Jang, Albert, Chen, Shuang R., Garje, Rohan, Acharya, Luna, Hwang, Clara, Pilling, Amanda, Oh, William, Jun, Tomi, Natesan, Divya, Nguyen, Chris, Kilari, Deepak, Pierro, Michael, Thapa, Bicky, Cackowski, Frank, Mack, Alleda, Heath, Elisabeth, Marshall, Catherine H., Tagawa, Scott T., Halabi, Susan, Schweizer, Michael T., Armstrong, Andrew, Dorff, Tanya, Alva, Ajjai, McKay, Rana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9385488/
https://www.ncbi.nlm.nih.gov/pubmed/34363009
http://dx.doi.org/10.1038/s41391-021-00433-1
_version_ 1784769604960124928
author Koshkin, Vadim S.
Patel, Vaibhav G.
Ali, Alicia
Bilen, Mehmet A.
Ravindranathan, Deepak
Park, Joseph J.
Kellezi, Olesia
Cieslik, Marcin
Shaya, Justin
Cabal, Angelo
Brown, Landon
Labriola, Matthew
Graham, Laura S.
Pritchard, Colin
Tripathi, Abhishek
Nusrat, Sanober
Barata, Pedro
Jang, Albert
Chen, Shuang R.
Garje, Rohan
Acharya, Luna
Hwang, Clara
Pilling, Amanda
Oh, William
Jun, Tomi
Natesan, Divya
Nguyen, Chris
Kilari, Deepak
Pierro, Michael
Thapa, Bicky
Cackowski, Frank
Mack, Alleda
Heath, Elisabeth
Marshall, Catherine H.
Tagawa, Scott T.
Halabi, Susan
Schweizer, Michael T.
Armstrong, Andrew
Dorff, Tanya
Alva, Ajjai
McKay, Rana
author_facet Koshkin, Vadim S.
Patel, Vaibhav G.
Ali, Alicia
Bilen, Mehmet A.
Ravindranathan, Deepak
Park, Joseph J.
Kellezi, Olesia
Cieslik, Marcin
Shaya, Justin
Cabal, Angelo
Brown, Landon
Labriola, Matthew
Graham, Laura S.
Pritchard, Colin
Tripathi, Abhishek
Nusrat, Sanober
Barata, Pedro
Jang, Albert
Chen, Shuang R.
Garje, Rohan
Acharya, Luna
Hwang, Clara
Pilling, Amanda
Oh, William
Jun, Tomi
Natesan, Divya
Nguyen, Chris
Kilari, Deepak
Pierro, Michael
Thapa, Bicky
Cackowski, Frank
Mack, Alleda
Heath, Elisabeth
Marshall, Catherine H.
Tagawa, Scott T.
Halabi, Susan
Schweizer, Michael T.
Armstrong, Andrew
Dorff, Tanya
Alva, Ajjai
McKay, Rana
author_sort Koshkin, Vadim S.
collection PubMed
description PURPOSE: Prostate cancer is a heterogeneous disease with variable clinical outcomes. Despite numerous recent approvals of novel therapies, castration-resistant prostate cancer remains lethal. A “real-world” clinical-genomic database is urgently needed to enhance our characterization of advanced prostate cancer and further enable precision oncology. METHODS: The Prostate Cancer Precision Medicine Multi-Institutional Collaborative Effort (PROMISE) is a consortium whose aims are to establish a repository of de-identified clinical and genomic patient data that are linked to patient outcomes. The consortium structure includes a (1) bio-informatics committee to standardize genomic data and provide quality control, (2) biostatistics committee to independently perform statistical analyses, (3) executive committee to review and select proposals of relevant questions for the consortium to address, (4) diversity/inclusion committee to address important clinical questions pertaining to racial disparities, and (5) patient advocacy committee to understand patient perspectives to improve patients’ quality of care. RESULTS: The PROMISE consortium was formed by 16 academic institutions in early 2020 and a secure RedCap database was created. The first patient record was entered into the database in April 2020 and over 1000 records have been entered as of early 2021. Data entry is proceeding as planned with the goal to have over 2500 patient records by the end of 2021. CONCLUSIONS: The PROMISE consortium provides a powerful clinical-genomic platform to interrogate and address data gaps that have arisen with increased genomic testing in the clinical management of prostate cancer. The dataset incorporates data from patient populations that are often underrepresented in clinical trials, generates new hypotheses to direct further research, and addresses important clinical questions that are otherwise difficult to investigate in prospective studies.
format Online
Article
Text
id pubmed-9385488
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-93854882022-08-19 PROMISE: a real-world clinical-genomic database to address knowledge gaps in prostate cancer Koshkin, Vadim S. Patel, Vaibhav G. Ali, Alicia Bilen, Mehmet A. Ravindranathan, Deepak Park, Joseph J. Kellezi, Olesia Cieslik, Marcin Shaya, Justin Cabal, Angelo Brown, Landon Labriola, Matthew Graham, Laura S. Pritchard, Colin Tripathi, Abhishek Nusrat, Sanober Barata, Pedro Jang, Albert Chen, Shuang R. Garje, Rohan Acharya, Luna Hwang, Clara Pilling, Amanda Oh, William Jun, Tomi Natesan, Divya Nguyen, Chris Kilari, Deepak Pierro, Michael Thapa, Bicky Cackowski, Frank Mack, Alleda Heath, Elisabeth Marshall, Catherine H. Tagawa, Scott T. Halabi, Susan Schweizer, Michael T. Armstrong, Andrew Dorff, Tanya Alva, Ajjai McKay, Rana Prostate Cancer Prostatic Dis Review Article PURPOSE: Prostate cancer is a heterogeneous disease with variable clinical outcomes. Despite numerous recent approvals of novel therapies, castration-resistant prostate cancer remains lethal. A “real-world” clinical-genomic database is urgently needed to enhance our characterization of advanced prostate cancer and further enable precision oncology. METHODS: The Prostate Cancer Precision Medicine Multi-Institutional Collaborative Effort (PROMISE) is a consortium whose aims are to establish a repository of de-identified clinical and genomic patient data that are linked to patient outcomes. The consortium structure includes a (1) bio-informatics committee to standardize genomic data and provide quality control, (2) biostatistics committee to independently perform statistical analyses, (3) executive committee to review and select proposals of relevant questions for the consortium to address, (4) diversity/inclusion committee to address important clinical questions pertaining to racial disparities, and (5) patient advocacy committee to understand patient perspectives to improve patients’ quality of care. RESULTS: The PROMISE consortium was formed by 16 academic institutions in early 2020 and a secure RedCap database was created. The first patient record was entered into the database in April 2020 and over 1000 records have been entered as of early 2021. Data entry is proceeding as planned with the goal to have over 2500 patient records by the end of 2021. CONCLUSIONS: The PROMISE consortium provides a powerful clinical-genomic platform to interrogate and address data gaps that have arisen with increased genomic testing in the clinical management of prostate cancer. The dataset incorporates data from patient populations that are often underrepresented in clinical trials, generates new hypotheses to direct further research, and addresses important clinical questions that are otherwise difficult to investigate in prospective studies. Nature Publishing Group UK 2021-08-06 2022 /pmc/articles/PMC9385488/ /pubmed/34363009 http://dx.doi.org/10.1038/s41391-021-00433-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Review Article
Koshkin, Vadim S.
Patel, Vaibhav G.
Ali, Alicia
Bilen, Mehmet A.
Ravindranathan, Deepak
Park, Joseph J.
Kellezi, Olesia
Cieslik, Marcin
Shaya, Justin
Cabal, Angelo
Brown, Landon
Labriola, Matthew
Graham, Laura S.
Pritchard, Colin
Tripathi, Abhishek
Nusrat, Sanober
Barata, Pedro
Jang, Albert
Chen, Shuang R.
Garje, Rohan
Acharya, Luna
Hwang, Clara
Pilling, Amanda
Oh, William
Jun, Tomi
Natesan, Divya
Nguyen, Chris
Kilari, Deepak
Pierro, Michael
Thapa, Bicky
Cackowski, Frank
Mack, Alleda
Heath, Elisabeth
Marshall, Catherine H.
Tagawa, Scott T.
Halabi, Susan
Schweizer, Michael T.
Armstrong, Andrew
Dorff, Tanya
Alva, Ajjai
McKay, Rana
PROMISE: a real-world clinical-genomic database to address knowledge gaps in prostate cancer
title PROMISE: a real-world clinical-genomic database to address knowledge gaps in prostate cancer
title_full PROMISE: a real-world clinical-genomic database to address knowledge gaps in prostate cancer
title_fullStr PROMISE: a real-world clinical-genomic database to address knowledge gaps in prostate cancer
title_full_unstemmed PROMISE: a real-world clinical-genomic database to address knowledge gaps in prostate cancer
title_short PROMISE: a real-world clinical-genomic database to address knowledge gaps in prostate cancer
title_sort promise: a real-world clinical-genomic database to address knowledge gaps in prostate cancer
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9385488/
https://www.ncbi.nlm.nih.gov/pubmed/34363009
http://dx.doi.org/10.1038/s41391-021-00433-1
work_keys_str_mv AT koshkinvadims promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT patelvaibhavg promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT alialicia promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT bilenmehmeta promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT ravindranathandeepak promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT parkjosephj promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT kelleziolesia promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT cieslikmarcin promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT shayajustin promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT cabalangelo promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT brownlandon promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT labriolamatthew promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT grahamlauras promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT pritchardcolin promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT tripathiabhishek promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT nusratsanober promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT baratapedro promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT jangalbert promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT chenshuangr promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT garjerohan promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT acharyaluna promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT hwangclara promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT pillingamanda promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT ohwilliam promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT juntomi promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT natesandivya promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT nguyenchris promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT kilarideepak promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT pierromichael promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT thapabicky promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT cackowskifrank promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT mackalleda promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT heathelisabeth promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT marshallcatherineh promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT tagawascottt promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT halabisusan promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT schweizermichaelt promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT armstrongandrew promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT dorfftanya promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT alvaajjai promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer
AT mckayrana promisearealworldclinicalgenomicdatabasetoaddressknowledgegapsinprostatecancer