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A pan-cancer analysis reveals the genetic alterations and immunotherapy of Piezo2 in human cancer
Background: Piezo2 is a transmembrane-spanning ion channel protein implicated in multiple physiological processes, including cell proliferation and angiogenesis in many cell types. However, Piezo2 was recognized as representing a double-edged sword in terms of tumor growth. The prognostic and immuno...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9386142/ https://www.ncbi.nlm.nih.gov/pubmed/35991548 http://dx.doi.org/10.3389/fgene.2022.918977 |
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author | Liu, Xin Jia, Yangpu Wang, Zhihui Zhang, Zhaoxiong Fu, Weihua |
author_facet | Liu, Xin Jia, Yangpu Wang, Zhihui Zhang, Zhaoxiong Fu, Weihua |
author_sort | Liu, Xin |
collection | PubMed |
description | Background: Piezo2 is a transmembrane-spanning ion channel protein implicated in multiple physiological processes, including cell proliferation and angiogenesis in many cell types. However, Piezo2 was recognized as representing a double-edged sword in terms of tumor growth. The prognostic and immunotherapeutic roles of Piezo2 in pan-cancer have not been reported. Methods: In this study, several databases available including the UCSC Xena database, HPA, TIDE, GSEA, and cBioportal were used to investigate the expression, alterations, associations with immune indicators, and prognostic roles of Piezo2 across pan-cancer. R software and Perl scripts were used to process the raw data acquired from the UCSC Xena database. Results: Based on processed data, our results suggested that Piezo2 expression levels were tissue-dependent in different tumor tissues. Meanwhile, the survival analysis reflected that patients suffering from KIRC, LUAD, and USC with high Piezo2 expression had good OS, while those suffering from KIRP and SARC with high Piezo2 expression had poor OS. In addition, our results showed that Piezo2 expression was associated with the infiltration of CD4(+) T memory cells, mast cells, and dendritic cells. These results suggested that Piezo2 may involve tumor progression by influencing immune infiltration or regulating immune cell function. Further analysis indicated that Piezo2 could influence TME by regulating T-cell dysfunction. We also found that gene mutation was the most common genetic alteration of Piezo2. The GSEA analysis revealed that Piezo2 was associated with calcium ion transport, the activation of the immune response, antigen processing and presentation pathways. Conclusion: Our study showed the expression and prognostic features of Piezo2 and highlighted its associations with genetic alterations and immune signatures in pan-cancer. Moreover, we provided several novel insights for further research on the therapeutic potential of Piezo2. |
format | Online Article Text |
id | pubmed-9386142 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93861422022-08-19 A pan-cancer analysis reveals the genetic alterations and immunotherapy of Piezo2 in human cancer Liu, Xin Jia, Yangpu Wang, Zhihui Zhang, Zhaoxiong Fu, Weihua Front Genet Genetics Background: Piezo2 is a transmembrane-spanning ion channel protein implicated in multiple physiological processes, including cell proliferation and angiogenesis in many cell types. However, Piezo2 was recognized as representing a double-edged sword in terms of tumor growth. The prognostic and immunotherapeutic roles of Piezo2 in pan-cancer have not been reported. Methods: In this study, several databases available including the UCSC Xena database, HPA, TIDE, GSEA, and cBioportal were used to investigate the expression, alterations, associations with immune indicators, and prognostic roles of Piezo2 across pan-cancer. R software and Perl scripts were used to process the raw data acquired from the UCSC Xena database. Results: Based on processed data, our results suggested that Piezo2 expression levels were tissue-dependent in different tumor tissues. Meanwhile, the survival analysis reflected that patients suffering from KIRC, LUAD, and USC with high Piezo2 expression had good OS, while those suffering from KIRP and SARC with high Piezo2 expression had poor OS. In addition, our results showed that Piezo2 expression was associated with the infiltration of CD4(+) T memory cells, mast cells, and dendritic cells. These results suggested that Piezo2 may involve tumor progression by influencing immune infiltration or regulating immune cell function. Further analysis indicated that Piezo2 could influence TME by regulating T-cell dysfunction. We also found that gene mutation was the most common genetic alteration of Piezo2. The GSEA analysis revealed that Piezo2 was associated with calcium ion transport, the activation of the immune response, antigen processing and presentation pathways. Conclusion: Our study showed the expression and prognostic features of Piezo2 and highlighted its associations with genetic alterations and immune signatures in pan-cancer. Moreover, we provided several novel insights for further research on the therapeutic potential of Piezo2. Frontiers Media S.A. 2022-08-04 /pmc/articles/PMC9386142/ /pubmed/35991548 http://dx.doi.org/10.3389/fgene.2022.918977 Text en Copyright © 2022 Liu, Jia, Wang, Zhang and Fu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Liu, Xin Jia, Yangpu Wang, Zhihui Zhang, Zhaoxiong Fu, Weihua A pan-cancer analysis reveals the genetic alterations and immunotherapy of Piezo2 in human cancer |
title | A pan-cancer analysis reveals the genetic alterations and immunotherapy of Piezo2 in human cancer |
title_full | A pan-cancer analysis reveals the genetic alterations and immunotherapy of Piezo2 in human cancer |
title_fullStr | A pan-cancer analysis reveals the genetic alterations and immunotherapy of Piezo2 in human cancer |
title_full_unstemmed | A pan-cancer analysis reveals the genetic alterations and immunotherapy of Piezo2 in human cancer |
title_short | A pan-cancer analysis reveals the genetic alterations and immunotherapy of Piezo2 in human cancer |
title_sort | pan-cancer analysis reveals the genetic alterations and immunotherapy of piezo2 in human cancer |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9386142/ https://www.ncbi.nlm.nih.gov/pubmed/35991548 http://dx.doi.org/10.3389/fgene.2022.918977 |
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