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Identification of key genes controlling L-ascorbic acid during Jujube (Ziziphus jujuba Mill.) fruit development by integrating transcriptome and metabolome analysis

Chinese jujube (Ziziphus jujuba) is a vital economic tree native to China. Jujube fruit with abundant L-Ascorbic Acid (AsA) is an ideal material for studying the mechanism of AsA biosynthesis and metabolism. However, the key transcription factors regulating AsA anabolism in jujube have not been repo...

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Autores principales: Lu, Dongye, Wu, Yang, Pan, Qinghua, Zhang, Yuping, Qi, Yuanyong, Bao, Wenhui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9386341/
https://www.ncbi.nlm.nih.gov/pubmed/35991405
http://dx.doi.org/10.3389/fpls.2022.950103
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author Lu, Dongye
Wu, Yang
Pan, Qinghua
Zhang, Yuping
Qi, Yuanyong
Bao, Wenhui
author_facet Lu, Dongye
Wu, Yang
Pan, Qinghua
Zhang, Yuping
Qi, Yuanyong
Bao, Wenhui
author_sort Lu, Dongye
collection PubMed
description Chinese jujube (Ziziphus jujuba) is a vital economic tree native to China. Jujube fruit with abundant L-Ascorbic Acid (AsA) is an ideal material for studying the mechanism of AsA biosynthesis and metabolism. However, the key transcription factors regulating AsA anabolism in jujube have not been reported. Here, we used jujube variety “Mazao” as the experimental material, conducted an integrative analysis of transcriptome and metabolome to investigate changes in differential genes and metabolites, and find the key genes regulating AsA during jujube fruit growth. The results showed that AsA was mostly synthesized in the young stage and enlargement stage, ZjMDHAR gene takes an important part in the AsA recycling. Three gene networks/modules were highly correlated with AsA, among them, three genes were identified as candidates controlling AsA, including ZjERF17 (LOC107404975), ZjbZIP9 (LOC107406320), and ZjGBF4 (LOC107421670). These results provide new directions and insights for further study on the regulation mechanism of AsA in jujube.
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spelling pubmed-93863412022-08-19 Identification of key genes controlling L-ascorbic acid during Jujube (Ziziphus jujuba Mill.) fruit development by integrating transcriptome and metabolome analysis Lu, Dongye Wu, Yang Pan, Qinghua Zhang, Yuping Qi, Yuanyong Bao, Wenhui Front Plant Sci Plant Science Chinese jujube (Ziziphus jujuba) is a vital economic tree native to China. Jujube fruit with abundant L-Ascorbic Acid (AsA) is an ideal material for studying the mechanism of AsA biosynthesis and metabolism. However, the key transcription factors regulating AsA anabolism in jujube have not been reported. Here, we used jujube variety “Mazao” as the experimental material, conducted an integrative analysis of transcriptome and metabolome to investigate changes in differential genes and metabolites, and find the key genes regulating AsA during jujube fruit growth. The results showed that AsA was mostly synthesized in the young stage and enlargement stage, ZjMDHAR gene takes an important part in the AsA recycling. Three gene networks/modules were highly correlated with AsA, among them, three genes were identified as candidates controlling AsA, including ZjERF17 (LOC107404975), ZjbZIP9 (LOC107406320), and ZjGBF4 (LOC107421670). These results provide new directions and insights for further study on the regulation mechanism of AsA in jujube. Frontiers Media S.A. 2022-08-04 /pmc/articles/PMC9386341/ /pubmed/35991405 http://dx.doi.org/10.3389/fpls.2022.950103 Text en Copyright © 2022 Lu, Wu, Pan, Zhang, Qi and Bao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Lu, Dongye
Wu, Yang
Pan, Qinghua
Zhang, Yuping
Qi, Yuanyong
Bao, Wenhui
Identification of key genes controlling L-ascorbic acid during Jujube (Ziziphus jujuba Mill.) fruit development by integrating transcriptome and metabolome analysis
title Identification of key genes controlling L-ascorbic acid during Jujube (Ziziphus jujuba Mill.) fruit development by integrating transcriptome and metabolome analysis
title_full Identification of key genes controlling L-ascorbic acid during Jujube (Ziziphus jujuba Mill.) fruit development by integrating transcriptome and metabolome analysis
title_fullStr Identification of key genes controlling L-ascorbic acid during Jujube (Ziziphus jujuba Mill.) fruit development by integrating transcriptome and metabolome analysis
title_full_unstemmed Identification of key genes controlling L-ascorbic acid during Jujube (Ziziphus jujuba Mill.) fruit development by integrating transcriptome and metabolome analysis
title_short Identification of key genes controlling L-ascorbic acid during Jujube (Ziziphus jujuba Mill.) fruit development by integrating transcriptome and metabolome analysis
title_sort identification of key genes controlling l-ascorbic acid during jujube (ziziphus jujuba mill.) fruit development by integrating transcriptome and metabolome analysis
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9386341/
https://www.ncbi.nlm.nih.gov/pubmed/35991405
http://dx.doi.org/10.3389/fpls.2022.950103
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