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Analysis of risk factors progression of preterm delivery using electronic health records

BACKGROUND: Preterm deliveries have many negative health implications on both mother and child. Identifying the population level factors that increase the risk of preterm deliveries is an important step in the direction of mitigating the impact and reducing the frequency of occurrence of preterm del...

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Autores principales: Safi, Zeineb, Venugopal, Neethu, Ali, Haytham, Makhlouf, Michel, Farooq, Faisal, Boughorbel, Sabri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9386949/
https://www.ncbi.nlm.nih.gov/pubmed/35978434
http://dx.doi.org/10.1186/s13040-022-00298-7
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author Safi, Zeineb
Venugopal, Neethu
Ali, Haytham
Makhlouf, Michel
Farooq, Faisal
Boughorbel, Sabri
author_facet Safi, Zeineb
Venugopal, Neethu
Ali, Haytham
Makhlouf, Michel
Farooq, Faisal
Boughorbel, Sabri
author_sort Safi, Zeineb
collection PubMed
description BACKGROUND: Preterm deliveries have many negative health implications on both mother and child. Identifying the population level factors that increase the risk of preterm deliveries is an important step in the direction of mitigating the impact and reducing the frequency of occurrence of preterm deliveries. The purpose of this work is to identify preterm delivery risk factors and their progression throughout the pregnancy from a large collection of Electronic Health Records (EHR). RESULTS: The study cohort includes about 60,000 deliveries in the USA with the complete medical history from EHR for diagnoses, medications and procedures. We propose a temporal analysis of risk factors by estimating and comparing risk ratios and variable importance at different time points prior to the delivery event. We selected the following time points before delivery: 0, 12 and 24 week(s) of gestation. We did so by conducting a retrospective cohort study of patient history for a selected set of mothers who delivered preterm and a control group of mothers that delivered full-term. We analyzed the extracted data using logistic regression and random forests models. The results of our analyses showed that the highest risk ratio and variable importance corresponds to history of previous preterm delivery. Other risk factors were identified, some of which are consistent with those that are reported in the literature, others need further investigation. CONCLUSIONS: The comparative analysis of the risk factors at different time points showed that risk factors in the early pregnancy related to patient history and chronic condition, while the risk factors in late pregnancy are specific to the current pregnancy. Our analysis unifies several previously reported studies on preterm risk factors. It also gives important insights on the changes of risk factors in the course of pregnancy. The code used for data analysis will be made available on github.
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spelling pubmed-93869492022-08-19 Analysis of risk factors progression of preterm delivery using electronic health records Safi, Zeineb Venugopal, Neethu Ali, Haytham Makhlouf, Michel Farooq, Faisal Boughorbel, Sabri BioData Min Research BACKGROUND: Preterm deliveries have many negative health implications on both mother and child. Identifying the population level factors that increase the risk of preterm deliveries is an important step in the direction of mitigating the impact and reducing the frequency of occurrence of preterm deliveries. The purpose of this work is to identify preterm delivery risk factors and their progression throughout the pregnancy from a large collection of Electronic Health Records (EHR). RESULTS: The study cohort includes about 60,000 deliveries in the USA with the complete medical history from EHR for diagnoses, medications and procedures. We propose a temporal analysis of risk factors by estimating and comparing risk ratios and variable importance at different time points prior to the delivery event. We selected the following time points before delivery: 0, 12 and 24 week(s) of gestation. We did so by conducting a retrospective cohort study of patient history for a selected set of mothers who delivered preterm and a control group of mothers that delivered full-term. We analyzed the extracted data using logistic regression and random forests models. The results of our analyses showed that the highest risk ratio and variable importance corresponds to history of previous preterm delivery. Other risk factors were identified, some of which are consistent with those that are reported in the literature, others need further investigation. CONCLUSIONS: The comparative analysis of the risk factors at different time points showed that risk factors in the early pregnancy related to patient history and chronic condition, while the risk factors in late pregnancy are specific to the current pregnancy. Our analysis unifies several previously reported studies on preterm risk factors. It also gives important insights on the changes of risk factors in the course of pregnancy. The code used for data analysis will be made available on github. BioMed Central 2022-08-17 /pmc/articles/PMC9386949/ /pubmed/35978434 http://dx.doi.org/10.1186/s13040-022-00298-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Safi, Zeineb
Venugopal, Neethu
Ali, Haytham
Makhlouf, Michel
Farooq, Faisal
Boughorbel, Sabri
Analysis of risk factors progression of preterm delivery using electronic health records
title Analysis of risk factors progression of preterm delivery using electronic health records
title_full Analysis of risk factors progression of preterm delivery using electronic health records
title_fullStr Analysis of risk factors progression of preterm delivery using electronic health records
title_full_unstemmed Analysis of risk factors progression of preterm delivery using electronic health records
title_short Analysis of risk factors progression of preterm delivery using electronic health records
title_sort analysis of risk factors progression of preterm delivery using electronic health records
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9386949/
https://www.ncbi.nlm.nih.gov/pubmed/35978434
http://dx.doi.org/10.1186/s13040-022-00298-7
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