Whole-Genome Sequencing of Pseudoalteromonas sp. Strain KAN5, an Agar-Degrading Bacterium Isolated from the Gut of an Alga-Eating Fish

A strain of Pseudoalteromonas that degrades agar was isolated from the intestines of an alga-eating fish (Andamia tetradactyla). We named the strain KAN5 and report on the genome sequenced with the Oxford Nanopore Technologies platform. The 3.8-Mbp genome contains 3,428 protein-coding genes, and the...

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Autores principales: Kawase, Yuka, Tanabe, Takuma, Kawamukai, Makoto, Yoshida, Masa-aki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9387240/
https://www.ncbi.nlm.nih.gov/pubmed/35862930
http://dx.doi.org/10.1128/mra.00398-22
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author Kawase, Yuka
Tanabe, Takuma
Kawamukai, Makoto
Yoshida, Masa-aki
author_facet Kawase, Yuka
Tanabe, Takuma
Kawamukai, Makoto
Yoshida, Masa-aki
author_sort Kawase, Yuka
collection PubMed
description A strain of Pseudoalteromonas that degrades agar was isolated from the intestines of an alga-eating fish (Andamia tetradactyla). We named the strain KAN5 and report on the genome sequenced with the Oxford Nanopore Technologies platform. The 3.8-Mbp genome contains 3,428 protein-coding genes, and the genes involved in agar degradation were confirmed.
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spelling pubmed-93872402022-08-19 Whole-Genome Sequencing of Pseudoalteromonas sp. Strain KAN5, an Agar-Degrading Bacterium Isolated from the Gut of an Alga-Eating Fish Kawase, Yuka Tanabe, Takuma Kawamukai, Makoto Yoshida, Masa-aki Microbiol Resour Announc Genome Sequences A strain of Pseudoalteromonas that degrades agar was isolated from the intestines of an alga-eating fish (Andamia tetradactyla). We named the strain KAN5 and report on the genome sequenced with the Oxford Nanopore Technologies platform. The 3.8-Mbp genome contains 3,428 protein-coding genes, and the genes involved in agar degradation were confirmed. American Society for Microbiology 2022-07-07 /pmc/articles/PMC9387240/ /pubmed/35862930 http://dx.doi.org/10.1128/mra.00398-22 Text en Copyright © 2022 Kawase et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Kawase, Yuka
Tanabe, Takuma
Kawamukai, Makoto
Yoshida, Masa-aki
Whole-Genome Sequencing of Pseudoalteromonas sp. Strain KAN5, an Agar-Degrading Bacterium Isolated from the Gut of an Alga-Eating Fish
title Whole-Genome Sequencing of Pseudoalteromonas sp. Strain KAN5, an Agar-Degrading Bacterium Isolated from the Gut of an Alga-Eating Fish
title_full Whole-Genome Sequencing of Pseudoalteromonas sp. Strain KAN5, an Agar-Degrading Bacterium Isolated from the Gut of an Alga-Eating Fish
title_fullStr Whole-Genome Sequencing of Pseudoalteromonas sp. Strain KAN5, an Agar-Degrading Bacterium Isolated from the Gut of an Alga-Eating Fish
title_full_unstemmed Whole-Genome Sequencing of Pseudoalteromonas sp. Strain KAN5, an Agar-Degrading Bacterium Isolated from the Gut of an Alga-Eating Fish
title_short Whole-Genome Sequencing of Pseudoalteromonas sp. Strain KAN5, an Agar-Degrading Bacterium Isolated from the Gut of an Alga-Eating Fish
title_sort whole-genome sequencing of pseudoalteromonas sp. strain kan5, an agar-degrading bacterium isolated from the gut of an alga-eating fish
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9387240/
https://www.ncbi.nlm.nih.gov/pubmed/35862930
http://dx.doi.org/10.1128/mra.00398-22
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