The complete chloroplast genome of Pterobryopsis orientalis (Pterobryaceae, Hypnales) and its phylogenetic implications

Pterobryopsis orientalis (Müll. Hal.) M. Fleisch. 1917, a subtropical moss from the family Pterobryaceae, is native to the western Himalaya. In this study, the complete chloroplast genome of P. orientalis was sequenced using the Illumina NovaSeq 6000 platform, as a resource for future research on th...

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Autores principales: Han, Wei, Yu, Ningning, Li, Yin, Zhang, Li, Jia, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9387310/
https://www.ncbi.nlm.nih.gov/pubmed/35989877
http://dx.doi.org/10.1080/23802359.2022.2107448
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author Han, Wei
Yu, Ningning
Li, Yin
Zhang, Li
Jia, Yu
author_facet Han, Wei
Yu, Ningning
Li, Yin
Zhang, Li
Jia, Yu
author_sort Han, Wei
collection PubMed
description Pterobryopsis orientalis (Müll. Hal.) M. Fleisch. 1917, a subtropical moss from the family Pterobryaceae, is native to the western Himalaya. In this study, the complete chloroplast genome of P. orientalis was sequenced using the Illumina NovaSeq 6000 platform, as a resource for future research on the classification and evolution of the Pterobryaceae. The genome was 124,719 bp in length, consisting of a large single-copy (LSC: 87,401 bp), a small single-copy (SSC: 18,530 bp), and two inverted repeat regions (IRs: 18,788 bp). The genome consisted of 126 unique genes, including 82 protein-coding genes, 36 tRNA genes, and eight rRNA genes. The overall GC content of the whole chloroplast genome was 52.09%. Phylogenetic analysis showed that P. orientalis is closely related to the genus Calyptothecium.
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spelling pubmed-93873102022-08-19 The complete chloroplast genome of Pterobryopsis orientalis (Pterobryaceae, Hypnales) and its phylogenetic implications Han, Wei Yu, Ningning Li, Yin Zhang, Li Jia, Yu Mitochondrial DNA B Resour Plastome Announcement Pterobryopsis orientalis (Müll. Hal.) M. Fleisch. 1917, a subtropical moss from the family Pterobryaceae, is native to the western Himalaya. In this study, the complete chloroplast genome of P. orientalis was sequenced using the Illumina NovaSeq 6000 platform, as a resource for future research on the classification and evolution of the Pterobryaceae. The genome was 124,719 bp in length, consisting of a large single-copy (LSC: 87,401 bp), a small single-copy (SSC: 18,530 bp), and two inverted repeat regions (IRs: 18,788 bp). The genome consisted of 126 unique genes, including 82 protein-coding genes, 36 tRNA genes, and eight rRNA genes. The overall GC content of the whole chloroplast genome was 52.09%. Phylogenetic analysis showed that P. orientalis is closely related to the genus Calyptothecium. Taylor & Francis 2022-08-17 /pmc/articles/PMC9387310/ /pubmed/35989877 http://dx.doi.org/10.1080/23802359.2022.2107448 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Han, Wei
Yu, Ningning
Li, Yin
Zhang, Li
Jia, Yu
The complete chloroplast genome of Pterobryopsis orientalis (Pterobryaceae, Hypnales) and its phylogenetic implications
title The complete chloroplast genome of Pterobryopsis orientalis (Pterobryaceae, Hypnales) and its phylogenetic implications
title_full The complete chloroplast genome of Pterobryopsis orientalis (Pterobryaceae, Hypnales) and its phylogenetic implications
title_fullStr The complete chloroplast genome of Pterobryopsis orientalis (Pterobryaceae, Hypnales) and its phylogenetic implications
title_full_unstemmed The complete chloroplast genome of Pterobryopsis orientalis (Pterobryaceae, Hypnales) and its phylogenetic implications
title_short The complete chloroplast genome of Pterobryopsis orientalis (Pterobryaceae, Hypnales) and its phylogenetic implications
title_sort complete chloroplast genome of pterobryopsis orientalis (pterobryaceae, hypnales) and its phylogenetic implications
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9387310/
https://www.ncbi.nlm.nih.gov/pubmed/35989877
http://dx.doi.org/10.1080/23802359.2022.2107448
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