The complete chloroplast genome of Abies ernestii Rehder (Pinaceae) and its phylogenetic implications

Abies ernestii Rehder is endemic to the montane regions of Southwest China. Till now, phylogenetic relationships between A. ernestii and other closely related species remain unclear. In this study, we first characterized the complete chloroplast (cp) genome of A. ernestii. The whole cp genome was 12...

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Autores principales: Shao, Yi-Zhen, Shi, Zhi-Yuan, Wang, Zhao, Wang, Wei, Chen, Yun, Wen, Qian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Rapid Communication
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9387311/
https://www.ncbi.nlm.nih.gov/pubmed/35989878
http://dx.doi.org/10.1080/23802359.2022.2109435
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author Shao, Yi-Zhen
Shi, Zhi-Yuan
Wang, Zhao
Wang, Wei
Chen, Yun
Wen, Qian
author_facet Shao, Yi-Zhen
Shi, Zhi-Yuan
Wang, Zhao
Wang, Wei
Chen, Yun
Wen, Qian
author_sort Shao, Yi-Zhen
collection PubMed
description Abies ernestii Rehder is endemic to the montane regions of Southwest China. Till now, phylogenetic relationships between A. ernestii and other closely related species remain unclear. In this study, we first characterized the complete chloroplast (cp) genome of A. ernestii. The whole cp genome was 121,841 bp in size, including one hundred and thirteen genes. Results of comparative cp genome revealed that only ycf1 and ycf2 was characterized by a considerable variation. Our phylogenetic analyses supported the monophyly of the genus Abies and revealed a clear separation between A. ernestii and A. chensiensis Tiegh. This study highlights the significance of using cp genomes to examine species boundaries among closely related fir species.
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spelling pubmed-93873112022-08-19 The complete chloroplast genome of Abies ernestii Rehder (Pinaceae) and its phylogenetic implications Shao, Yi-Zhen Shi, Zhi-Yuan Wang, Zhao Wang, Wei Chen, Yun Wen, Qian Mitochondrial DNA B Resour Rapid Communication Abies ernestii Rehder is endemic to the montane regions of Southwest China. Till now, phylogenetic relationships between A. ernestii and other closely related species remain unclear. In this study, we first characterized the complete chloroplast (cp) genome of A. ernestii. The whole cp genome was 121,841 bp in size, including one hundred and thirteen genes. Results of comparative cp genome revealed that only ycf1 and ycf2 was characterized by a considerable variation. Our phylogenetic analyses supported the monophyly of the genus Abies and revealed a clear separation between A. ernestii and A. chensiensis Tiegh. This study highlights the significance of using cp genomes to examine species boundaries among closely related fir species. Taylor & Francis 2022-08-17 /pmc/articles/PMC9387311/ /pubmed/35989878 http://dx.doi.org/10.1080/23802359.2022.2109435 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rapid Communication
Shao, Yi-Zhen
Shi, Zhi-Yuan
Wang, Zhao
Wang, Wei
Chen, Yun
Wen, Qian
The complete chloroplast genome of Abies ernestii Rehder (Pinaceae) and its phylogenetic implications
title The complete chloroplast genome of Abies ernestii Rehder (Pinaceae) and its phylogenetic implications
title_full The complete chloroplast genome of Abies ernestii Rehder (Pinaceae) and its phylogenetic implications
title_fullStr The complete chloroplast genome of Abies ernestii Rehder (Pinaceae) and its phylogenetic implications
title_full_unstemmed The complete chloroplast genome of Abies ernestii Rehder (Pinaceae) and its phylogenetic implications
title_short The complete chloroplast genome of Abies ernestii Rehder (Pinaceae) and its phylogenetic implications
title_sort complete chloroplast genome of abies ernestii rehder (pinaceae) and its phylogenetic implications
topic Rapid Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9387311/
https://www.ncbi.nlm.nih.gov/pubmed/35989878
http://dx.doi.org/10.1080/23802359.2022.2109435
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