Cargando…
Characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: Geometridae)
Xanthabraxas hemionata (Guenée, 1858) is a medium-sized and slender-bodied forest pest in China. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of X. hemionata. This mitogenome was 15,309 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA gen...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9387340/ https://www.ncbi.nlm.nih.gov/pubmed/35989875 http://dx.doi.org/10.1080/23802359.2022.2107447 |
_version_ | 1784770000125427712 |
---|---|
author | Chen, Hongyu Li, Wei Shen, Shuo |
author_facet | Chen, Hongyu Li, Wei Shen, Shuo |
author_sort | Chen, Hongyu |
collection | PubMed |
description | Xanthabraxas hemionata (Guenée, 1858) is a medium-sized and slender-bodied forest pest in China. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of X. hemionata. This mitogenome was 15,309 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). The gene order was conserved and identical to that of most other previously sequenced Geometridae species. Most of the PCGs of X. hemionata, except for cox1, have the conventional ATN start codon. Except for four genes (cox1, cox2, nad5, and nad4) that end with the incomplete stop codon T−, all other PCGs terminated with the stop codon TAA. Phylogenetic analysis positioned X. hemionata in a well-supported clade with the other Ennominae species. The relationships (Ennominae + (Sterrhinae + Larentiinae)) were supported by Geometridae. |
format | Online Article Text |
id | pubmed-9387340 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-93873402022-08-19 Characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: Geometridae) Chen, Hongyu Li, Wei Shen, Shuo Mitochondrial DNA B Resour Mitogenome Announcement Xanthabraxas hemionata (Guenée, 1858) is a medium-sized and slender-bodied forest pest in China. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of X. hemionata. This mitogenome was 15,309 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). The gene order was conserved and identical to that of most other previously sequenced Geometridae species. Most of the PCGs of X. hemionata, except for cox1, have the conventional ATN start codon. Except for four genes (cox1, cox2, nad5, and nad4) that end with the incomplete stop codon T−, all other PCGs terminated with the stop codon TAA. Phylogenetic analysis positioned X. hemionata in a well-supported clade with the other Ennominae species. The relationships (Ennominae + (Sterrhinae + Larentiinae)) were supported by Geometridae. Taylor & Francis 2022-08-17 /pmc/articles/PMC9387340/ /pubmed/35989875 http://dx.doi.org/10.1080/23802359.2022.2107447 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Chen, Hongyu Li, Wei Shen, Shuo Characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: Geometridae) |
title | Characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: Geometridae) |
title_full | Characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: Geometridae) |
title_fullStr | Characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: Geometridae) |
title_full_unstemmed | Characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: Geometridae) |
title_short | Characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: Geometridae) |
title_sort | characterization and phylogenetic analysis of the mitochondrial genome of xanthabraxas hemionata (lepidoptera: geometridae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9387340/ https://www.ncbi.nlm.nih.gov/pubmed/35989875 http://dx.doi.org/10.1080/23802359.2022.2107447 |
work_keys_str_mv | AT chenhongyu characterizationandphylogeneticanalysisofthemitochondrialgenomeofxanthabraxashemionatalepidopterageometridae AT liwei characterizationandphylogeneticanalysisofthemitochondrialgenomeofxanthabraxashemionatalepidopterageometridae AT shenshuo characterizationandphylogeneticanalysisofthemitochondrialgenomeofxanthabraxashemionatalepidopterageometridae |