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EMT-Related Gene Signature Predicts the Prognosis in Uveal Melanoma Patients

BACKGROUND: Uveal melanoma (UVM) is the most common primary intraocular malignancy in adults. Epithelial-mesenchymal transition (EMT) is an essential regulator of the UVM's immune microenvironment. However, the precise role of EMT in UVM remains to be explored and the development of a related t...

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Autores principales: Lv, Yufei, He, Lixian, Jin, Mengyi, Sun, Wenxin, Tan, Gang, Liu, Zuguo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9391141/
https://www.ncbi.nlm.nih.gov/pubmed/35990996
http://dx.doi.org/10.1155/2022/5436988
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author Lv, Yufei
He, Lixian
Jin, Mengyi
Sun, Wenxin
Tan, Gang
Liu, Zuguo
author_facet Lv, Yufei
He, Lixian
Jin, Mengyi
Sun, Wenxin
Tan, Gang
Liu, Zuguo
author_sort Lv, Yufei
collection PubMed
description BACKGROUND: Uveal melanoma (UVM) is the most common primary intraocular malignancy in adults. Epithelial-mesenchymal transition (EMT) is an essential regulator of the UVM's immune microenvironment. However, the precise role of EMT in UVM remains to be explored and the development of a related treatment strategy is urgently needed. METHODS: Multiomics data and clinical information for TCGA-UVM were used to identify the EMT subtypes and analyze their regulatory role in the immune microenvironment in UVM. A machine-learning method based on the identified subtypes was utilized to construct the EMT feature-based prognostic model. External validation cohorts GSE84976 and GSE22138 were employed to validate the model's robustness. Immunotherapy cohort IMvigor210 was used to explore the model's potential to predict immunotherapy responsiveness. RESULTS: Two EMT subtypes were identified in UVM. The role of EMT in shaping the immune microenvironment and regulating cancer-immunity circle of UVM was analyzed. A robust prognostic model was presented and validated to predict patient prognosis. The model also predicted patient's immune features and immunotherapy responsiveness. CONCLUSION: The EMT-mediated immune features in UVM were illustrated, providing a reliable model to facilitate precise UVM treatment. This research may assist in decision-making during clinical UVM therapy.
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spelling pubmed-93911412022-08-20 EMT-Related Gene Signature Predicts the Prognosis in Uveal Melanoma Patients Lv, Yufei He, Lixian Jin, Mengyi Sun, Wenxin Tan, Gang Liu, Zuguo J Oncol Research Article BACKGROUND: Uveal melanoma (UVM) is the most common primary intraocular malignancy in adults. Epithelial-mesenchymal transition (EMT) is an essential regulator of the UVM's immune microenvironment. However, the precise role of EMT in UVM remains to be explored and the development of a related treatment strategy is urgently needed. METHODS: Multiomics data and clinical information for TCGA-UVM were used to identify the EMT subtypes and analyze their regulatory role in the immune microenvironment in UVM. A machine-learning method based on the identified subtypes was utilized to construct the EMT feature-based prognostic model. External validation cohorts GSE84976 and GSE22138 were employed to validate the model's robustness. Immunotherapy cohort IMvigor210 was used to explore the model's potential to predict immunotherapy responsiveness. RESULTS: Two EMT subtypes were identified in UVM. The role of EMT in shaping the immune microenvironment and regulating cancer-immunity circle of UVM was analyzed. A robust prognostic model was presented and validated to predict patient prognosis. The model also predicted patient's immune features and immunotherapy responsiveness. CONCLUSION: The EMT-mediated immune features in UVM were illustrated, providing a reliable model to facilitate precise UVM treatment. This research may assist in decision-making during clinical UVM therapy. Hindawi 2022-08-12 /pmc/articles/PMC9391141/ /pubmed/35990996 http://dx.doi.org/10.1155/2022/5436988 Text en Copyright © 2022 Yufei Lv et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lv, Yufei
He, Lixian
Jin, Mengyi
Sun, Wenxin
Tan, Gang
Liu, Zuguo
EMT-Related Gene Signature Predicts the Prognosis in Uveal Melanoma Patients
title EMT-Related Gene Signature Predicts the Prognosis in Uveal Melanoma Patients
title_full EMT-Related Gene Signature Predicts the Prognosis in Uveal Melanoma Patients
title_fullStr EMT-Related Gene Signature Predicts the Prognosis in Uveal Melanoma Patients
title_full_unstemmed EMT-Related Gene Signature Predicts the Prognosis in Uveal Melanoma Patients
title_short EMT-Related Gene Signature Predicts the Prognosis in Uveal Melanoma Patients
title_sort emt-related gene signature predicts the prognosis in uveal melanoma patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9391141/
https://www.ncbi.nlm.nih.gov/pubmed/35990996
http://dx.doi.org/10.1155/2022/5436988
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