Cargando…

Association of functional genetic variants in TFF1 and nephrolithiasis risk in a Chinese population

Trefoil Factor 1 (TFF1) is considered to be able to inhibit the formation of kidney stone. However, genetic variants in TFF1 and corresponding function in kidney stone development are still not well studied. In this study, the discovery set including 230 cases and 250 controls was used to analyze th...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Qiangdong, Jiang, Yan, Du, Mulong, Yang, Lei, Yuan, Qinbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9392923/
https://www.ncbi.nlm.nih.gov/pubmed/35987613
http://dx.doi.org/10.1186/s12894-022-01081-w
_version_ 1784771161225166848
author Wang, Qiangdong
Jiang, Yan
Du, Mulong
Yang, Lei
Yuan, Qinbo
author_facet Wang, Qiangdong
Jiang, Yan
Du, Mulong
Yang, Lei
Yuan, Qinbo
author_sort Wang, Qiangdong
collection PubMed
description Trefoil Factor 1 (TFF1) is considered to be able to inhibit the formation of kidney stone. However, genetic variants in TFF1 and corresponding function in kidney stone development are still not well studied. In this study, the discovery set including 230 cases and 250 controls was used to analyze the association between seven tagSNPs of TFF1 gene and the nephrolithiasis risk. Further evaluation was confirmed by the validation set comprising 307 cases and 461 controls. The consequences of the two-stage case–control study indicated that individuals with the rs3761376 A allele have significantly increased nephrolithiasis risk than those with the GG genotypes [adjusted odds ratio (OR) = 1.35, 95% confidence interval (CI) = 1.05–1.73]. Moreover, we also carried out a stratified analysis and found the increased nephrolithiasis risks at A allele among males, overweight individuals, no hypertensive individuals, nondiabetic individuals, smokers, and drinkers. In the following functional experiments, the notably lower expression of TFF1 was exhibited by the vectors carrying A allele compared with those carrying G allele in both luciferase (P = 0.022) and expression vectors (P = 0.041). In addition to tissue detection, we confirmed a significant inverse association of rs3761376 G > A and TFF1 gene expression (P < 0.001). These results suggest that TFF1 rs3761376 may serve as a potential biomarker to predict the risk of nephrolithiasis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-022-01081-w.
format Online
Article
Text
id pubmed-9392923
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-93929232022-08-22 Association of functional genetic variants in TFF1 and nephrolithiasis risk in a Chinese population Wang, Qiangdong Jiang, Yan Du, Mulong Yang, Lei Yuan, Qinbo BMC Urol Research Trefoil Factor 1 (TFF1) is considered to be able to inhibit the formation of kidney stone. However, genetic variants in TFF1 and corresponding function in kidney stone development are still not well studied. In this study, the discovery set including 230 cases and 250 controls was used to analyze the association between seven tagSNPs of TFF1 gene and the nephrolithiasis risk. Further evaluation was confirmed by the validation set comprising 307 cases and 461 controls. The consequences of the two-stage case–control study indicated that individuals with the rs3761376 A allele have significantly increased nephrolithiasis risk than those with the GG genotypes [adjusted odds ratio (OR) = 1.35, 95% confidence interval (CI) = 1.05–1.73]. Moreover, we also carried out a stratified analysis and found the increased nephrolithiasis risks at A allele among males, overweight individuals, no hypertensive individuals, nondiabetic individuals, smokers, and drinkers. In the following functional experiments, the notably lower expression of TFF1 was exhibited by the vectors carrying A allele compared with those carrying G allele in both luciferase (P = 0.022) and expression vectors (P = 0.041). In addition to tissue detection, we confirmed a significant inverse association of rs3761376 G > A and TFF1 gene expression (P < 0.001). These results suggest that TFF1 rs3761376 may serve as a potential biomarker to predict the risk of nephrolithiasis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-022-01081-w. BioMed Central 2022-08-20 /pmc/articles/PMC9392923/ /pubmed/35987613 http://dx.doi.org/10.1186/s12894-022-01081-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Wang, Qiangdong
Jiang, Yan
Du, Mulong
Yang, Lei
Yuan, Qinbo
Association of functional genetic variants in TFF1 and nephrolithiasis risk in a Chinese population
title Association of functional genetic variants in TFF1 and nephrolithiasis risk in a Chinese population
title_full Association of functional genetic variants in TFF1 and nephrolithiasis risk in a Chinese population
title_fullStr Association of functional genetic variants in TFF1 and nephrolithiasis risk in a Chinese population
title_full_unstemmed Association of functional genetic variants in TFF1 and nephrolithiasis risk in a Chinese population
title_short Association of functional genetic variants in TFF1 and nephrolithiasis risk in a Chinese population
title_sort association of functional genetic variants in tff1 and nephrolithiasis risk in a chinese population
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9392923/
https://www.ncbi.nlm.nih.gov/pubmed/35987613
http://dx.doi.org/10.1186/s12894-022-01081-w
work_keys_str_mv AT wangqiangdong associationoffunctionalgeneticvariantsintff1andnephrolithiasisriskinachinesepopulation
AT jiangyan associationoffunctionalgeneticvariantsintff1andnephrolithiasisriskinachinesepopulation
AT dumulong associationoffunctionalgeneticvariantsintff1andnephrolithiasisriskinachinesepopulation
AT yanglei associationoffunctionalgeneticvariantsintff1andnephrolithiasisriskinachinesepopulation
AT yuanqinbo associationoffunctionalgeneticvariantsintff1andnephrolithiasisriskinachinesepopulation