Cargando…

Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in Guangdong

Important forensic evidence traced from crime scenes, such as fecal materials, can help in the forensic investigation of criminal cases. Intestines are the largest microbial pool in the human body whose microbial community is considered to be the human “second fingerprint”. The present study explore...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Litao, Deng, Liting, Liu, Changhui, Huang, Enping, Han, Xiaolong, Xiao, Cheng, Liang, Xiaomin, Sun, Huilin, Liu, Chao, Chen, Ling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9393523/
https://www.ncbi.nlm.nih.gov/pubmed/36003930
http://dx.doi.org/10.3389/fmicb.2022.920780
_version_ 1784771287068966912
author Huang, Litao
Deng, Liting
Liu, Changhui
Huang, Enping
Han, Xiaolong
Xiao, Cheng
Liang, Xiaomin
Sun, Huilin
Liu, Chao
Chen, Ling
author_facet Huang, Litao
Deng, Liting
Liu, Changhui
Huang, Enping
Han, Xiaolong
Xiao, Cheng
Liang, Xiaomin
Sun, Huilin
Liu, Chao
Chen, Ling
author_sort Huang, Litao
collection PubMed
description Important forensic evidence traced from crime scenes, such as fecal materials, can help in the forensic investigation of criminal cases. Intestines are the largest microbial pool in the human body whose microbial community is considered to be the human “second fingerprint”. The present study explored the potential for community characteristics of gut microbes in forensic medicine. Fecal microbiota profiles of healthy individuals from three representative Han populations (Guangzhou, Shantou and Meizhou) in Guangdong Province, China were evaluated using High-throughput sequencing of V3-V4 hypervariable regions of the 16SrRNA gene. Results of the present study showed that at the genus level, Shantou, Guangzhou, and Meizhou behaved as Enterotype1, Enterotype2, and Enterotype3, which were mainly composed of Bacteroides, Prevotella, and Blautia, respectively. Based on OTU abundance at the genus level, using the random forest prediction model, it was found that there might be potential for distinguishing individuals of Guangzhou, Meizhou, and Shantou according to their fecal microbial community. Moreover, the findings of the microbial community of fecal samples in the present study were significantly different from that of saliva samples reported in our previous study, and thus it is evident that the saliva and feces can be distinguished. In conclusion, this study reported the fecal microbial signature of three Han populations, which may provide basic data for the potential application in forensic practice, containing body fluid identification, and geographical inference.
format Online
Article
Text
id pubmed-9393523
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-93935232022-08-23 Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in Guangdong Huang, Litao Deng, Liting Liu, Changhui Huang, Enping Han, Xiaolong Xiao, Cheng Liang, Xiaomin Sun, Huilin Liu, Chao Chen, Ling Front Microbiol Microbiology Important forensic evidence traced from crime scenes, such as fecal materials, can help in the forensic investigation of criminal cases. Intestines are the largest microbial pool in the human body whose microbial community is considered to be the human “second fingerprint”. The present study explored the potential for community characteristics of gut microbes in forensic medicine. Fecal microbiota profiles of healthy individuals from three representative Han populations (Guangzhou, Shantou and Meizhou) in Guangdong Province, China were evaluated using High-throughput sequencing of V3-V4 hypervariable regions of the 16SrRNA gene. Results of the present study showed that at the genus level, Shantou, Guangzhou, and Meizhou behaved as Enterotype1, Enterotype2, and Enterotype3, which were mainly composed of Bacteroides, Prevotella, and Blautia, respectively. Based on OTU abundance at the genus level, using the random forest prediction model, it was found that there might be potential for distinguishing individuals of Guangzhou, Meizhou, and Shantou according to their fecal microbial community. Moreover, the findings of the microbial community of fecal samples in the present study were significantly different from that of saliva samples reported in our previous study, and thus it is evident that the saliva and feces can be distinguished. In conclusion, this study reported the fecal microbial signature of three Han populations, which may provide basic data for the potential application in forensic practice, containing body fluid identification, and geographical inference. Frontiers Media S.A. 2022-08-08 /pmc/articles/PMC9393523/ /pubmed/36003930 http://dx.doi.org/10.3389/fmicb.2022.920780 Text en Copyright © 2022 Huang, Deng, Liu, Huang, Han, Xiao, Liang, Sun, Liu and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Huang, Litao
Deng, Liting
Liu, Changhui
Huang, Enping
Han, Xiaolong
Xiao, Cheng
Liang, Xiaomin
Sun, Huilin
Liu, Chao
Chen, Ling
Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in Guangdong
title Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in Guangdong
title_full Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in Guangdong
title_fullStr Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in Guangdong
title_full_unstemmed Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in Guangdong
title_short Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in Guangdong
title_sort fecal microbial signatures of healthy han individuals from three bio-geographical zones in guangdong
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9393523/
https://www.ncbi.nlm.nih.gov/pubmed/36003930
http://dx.doi.org/10.3389/fmicb.2022.920780
work_keys_str_mv AT huanglitao fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT dengliting fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT liuchanghui fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT huangenping fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT hanxiaolong fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT xiaocheng fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT liangxiaomin fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT sunhuilin fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT liuchao fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong
AT chenling fecalmicrobialsignaturesofhealthyhanindividualsfromthreebiogeographicalzonesinguangdong