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Mandrake: visualizing microbial population structure by embedding millions of genomes into a low-dimensional representation

In less than a decade, population genomics of microbes has progressed from the effort of sequencing dozens of strains to thousands, or even tens of thousands of strains in a single study. There are now hundreds of thousands of genomes available even for a single bacterial species, and the number of...

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Detalles Bibliográficos
Autores principales: Lees, John A., Tonkin-Hill, Gerry, Yang, Zhirong, Corander, Jukka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9393562/
https://www.ncbi.nlm.nih.gov/pubmed/35989601
http://dx.doi.org/10.1098/rstb.2021.0237