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Estimation of the probability risks of African swine fever outbreaks using the maximum entropy method in North Sumatra Province, Indonesia
BACKGROUND AND AIM: African swine fever (ASF) is an infectious disease and a major viral pig disease that threatens pork production in several locations globally. The mortality rate of ASF in domestic pigs is very high, causing a decrease in pig populations and significant economic losses for farmer...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Veterinary World
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394140/ https://www.ncbi.nlm.nih.gov/pubmed/36185516 http://dx.doi.org/10.14202/vetworld.2022.1814-1820 |
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author | Primatika, Roza Azizah Sudarnika, Etih Sumiarto, Bambang Basri, Chaerul |
author_facet | Primatika, Roza Azizah Sudarnika, Etih Sumiarto, Bambang Basri, Chaerul |
author_sort | Primatika, Roza Azizah |
collection | PubMed |
description | BACKGROUND AND AIM: African swine fever (ASF) is an infectious disease and a major viral pig disease that threatens pork production in several locations globally. The mortality rate of ASF in domestic pigs is very high, causing a decrease in pig populations and significant economic losses for farmers. Environmental or ecological risk factors are the most important associated with the spread of the ASF virus. Environmental (or ecological) niche models are commonly used to estimate the probability of an event using the maximum entropy (Maxent) method. This study aimed to estimate the probability risk of future ASF outbreaks in North Sumatra, Indonesia. MATERIALS AND METHODS: Secondary data from the National Animal Health System Database (iSIKHNAS), including data on the ASF outbreaks of 2019–2020 in North Sumatra, Indonesia, were used in this study. The first analysis performed involved the identification of environmental risk factors using multiple regression analysis. The second analysis performed was the estimation of probability risk for future ASF outbreaks in North Sumatra, Indonesia, using the Maxent method. Data processing was performed using Microsoft Excel, ArcGIS version 10.5 software (ESRI, California, United States), Maxent version 3.4.4 software, and Rstudio (http://www.r-project.org/). RESULTS: The Maxent method was found to be highly accurate with a statistically significant area under the curve value of 0.860. The greatest contributing environmental factor identified by the model was the harbor, which contributed 57%. The range of high probability risk of future ASF outbreaks was found to be 0.723–0.84. CONCLUSION: The estimation of the highest probability risk of future ASF outbreaks in North Sumatra, Indonesia, was 0.723–0.84. The most contributing environmental factor identified using the Maxent method was harbors, at 57%. This methodology can be used to carry out subsequent ASF analyses and contribute to developing prevention and control strategies in this area. |
format | Online Article Text |
id | pubmed-9394140 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Veterinary World |
record_format | MEDLINE/PubMed |
spelling | pubmed-93941402022-09-30 Estimation of the probability risks of African swine fever outbreaks using the maximum entropy method in North Sumatra Province, Indonesia Primatika, Roza Azizah Sudarnika, Etih Sumiarto, Bambang Basri, Chaerul Vet World Research Article BACKGROUND AND AIM: African swine fever (ASF) is an infectious disease and a major viral pig disease that threatens pork production in several locations globally. The mortality rate of ASF in domestic pigs is very high, causing a decrease in pig populations and significant economic losses for farmers. Environmental or ecological risk factors are the most important associated with the spread of the ASF virus. Environmental (or ecological) niche models are commonly used to estimate the probability of an event using the maximum entropy (Maxent) method. This study aimed to estimate the probability risk of future ASF outbreaks in North Sumatra, Indonesia. MATERIALS AND METHODS: Secondary data from the National Animal Health System Database (iSIKHNAS), including data on the ASF outbreaks of 2019–2020 in North Sumatra, Indonesia, were used in this study. The first analysis performed involved the identification of environmental risk factors using multiple regression analysis. The second analysis performed was the estimation of probability risk for future ASF outbreaks in North Sumatra, Indonesia, using the Maxent method. Data processing was performed using Microsoft Excel, ArcGIS version 10.5 software (ESRI, California, United States), Maxent version 3.4.4 software, and Rstudio (http://www.r-project.org/). RESULTS: The Maxent method was found to be highly accurate with a statistically significant area under the curve value of 0.860. The greatest contributing environmental factor identified by the model was the harbor, which contributed 57%. The range of high probability risk of future ASF outbreaks was found to be 0.723–0.84. CONCLUSION: The estimation of the highest probability risk of future ASF outbreaks in North Sumatra, Indonesia, was 0.723–0.84. The most contributing environmental factor identified using the Maxent method was harbors, at 57%. This methodology can be used to carry out subsequent ASF analyses and contribute to developing prevention and control strategies in this area. Veterinary World 2022-07 2022-07-26 /pmc/articles/PMC9394140/ /pubmed/36185516 http://dx.doi.org/10.14202/vetworld.2022.1814-1820 Text en Copyright: © Primatika, et al. https://creativecommons.org/licenses/by/4.0/Open Access. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Primatika, Roza Azizah Sudarnika, Etih Sumiarto, Bambang Basri, Chaerul Estimation of the probability risks of African swine fever outbreaks using the maximum entropy method in North Sumatra Province, Indonesia |
title | Estimation of the probability risks of African swine fever outbreaks using the maximum entropy method in North Sumatra Province, Indonesia |
title_full | Estimation of the probability risks of African swine fever outbreaks using the maximum entropy method in North Sumatra Province, Indonesia |
title_fullStr | Estimation of the probability risks of African swine fever outbreaks using the maximum entropy method in North Sumatra Province, Indonesia |
title_full_unstemmed | Estimation of the probability risks of African swine fever outbreaks using the maximum entropy method in North Sumatra Province, Indonesia |
title_short | Estimation of the probability risks of African swine fever outbreaks using the maximum entropy method in North Sumatra Province, Indonesia |
title_sort | estimation of the probability risks of african swine fever outbreaks using the maximum entropy method in north sumatra province, indonesia |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394140/ https://www.ncbi.nlm.nih.gov/pubmed/36185516 http://dx.doi.org/10.14202/vetworld.2022.1814-1820 |
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