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A Comparison of Partial Information Decompositions Using Data from Real and Simulated Layer 5b Pyramidal Cells
Partial information decomposition allows the joint mutual information between an output and a set of inputs to be divided into components that are synergistic or shared or unique to each input. We consider five different decompositions and compare their results using data from layer 5b pyramidal cel...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394329/ https://www.ncbi.nlm.nih.gov/pubmed/35893001 http://dx.doi.org/10.3390/e24081021 |
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author | Kay, Jim W. Schulz, Jan M. Phillips, William A. |
author_facet | Kay, Jim W. Schulz, Jan M. Phillips, William A. |
author_sort | Kay, Jim W. |
collection | PubMed |
description | Partial information decomposition allows the joint mutual information between an output and a set of inputs to be divided into components that are synergistic or shared or unique to each input. We consider five different decompositions and compare their results using data from layer 5b pyramidal cells in two different studies. The first study was on the amplification of somatic action potential output by apical dendritic input and its regulation by dendritic inhibition. We find that two of the decompositions produce much larger estimates of synergy and shared information than the others, as well as large levels of unique misinformation. When within-neuron differences in the components are examined, the five methods produce more similar results for all but the shared information component, for which two methods produce a different statistical conclusion from the others. There are some differences in the expression of unique information asymmetry among the methods. It is significantly larger, on average, under dendritic inhibition. Three of the methods support a previous conclusion that apical amplification is reduced by dendritic inhibition. The second study used a detailed compartmental model to produce action potentials for many combinations of the numbers of basal and apical synaptic inputs. Decompositions of the entire data set produce similar differences to those in the first study. Two analyses of decompositions are conducted on subsets of the data. In the first, the decompositions reveal a bifurcation in unique information asymmetry. For three of the methods, this suggests that apical drive switches to basal drive as the strength of the basal input increases, while the other two show changing mixtures of information and misinformation. Decompositions produced using the second set of subsets show that all five decompositions provide support for properties of cooperative context-sensitivity—to varying extents. |
format | Online Article Text |
id | pubmed-9394329 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93943292022-08-23 A Comparison of Partial Information Decompositions Using Data from Real and Simulated Layer 5b Pyramidal Cells Kay, Jim W. Schulz, Jan M. Phillips, William A. Entropy (Basel) Article Partial information decomposition allows the joint mutual information between an output and a set of inputs to be divided into components that are synergistic or shared or unique to each input. We consider five different decompositions and compare their results using data from layer 5b pyramidal cells in two different studies. The first study was on the amplification of somatic action potential output by apical dendritic input and its regulation by dendritic inhibition. We find that two of the decompositions produce much larger estimates of synergy and shared information than the others, as well as large levels of unique misinformation. When within-neuron differences in the components are examined, the five methods produce more similar results for all but the shared information component, for which two methods produce a different statistical conclusion from the others. There are some differences in the expression of unique information asymmetry among the methods. It is significantly larger, on average, under dendritic inhibition. Three of the methods support a previous conclusion that apical amplification is reduced by dendritic inhibition. The second study used a detailed compartmental model to produce action potentials for many combinations of the numbers of basal and apical synaptic inputs. Decompositions of the entire data set produce similar differences to those in the first study. Two analyses of decompositions are conducted on subsets of the data. In the first, the decompositions reveal a bifurcation in unique information asymmetry. For three of the methods, this suggests that apical drive switches to basal drive as the strength of the basal input increases, while the other two show changing mixtures of information and misinformation. Decompositions produced using the second set of subsets show that all five decompositions provide support for properties of cooperative context-sensitivity—to varying extents. MDPI 2022-07-24 /pmc/articles/PMC9394329/ /pubmed/35893001 http://dx.doi.org/10.3390/e24081021 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kay, Jim W. Schulz, Jan M. Phillips, William A. A Comparison of Partial Information Decompositions Using Data from Real and Simulated Layer 5b Pyramidal Cells |
title | A Comparison of Partial Information Decompositions Using Data from Real and Simulated Layer 5b Pyramidal Cells |
title_full | A Comparison of Partial Information Decompositions Using Data from Real and Simulated Layer 5b Pyramidal Cells |
title_fullStr | A Comparison of Partial Information Decompositions Using Data from Real and Simulated Layer 5b Pyramidal Cells |
title_full_unstemmed | A Comparison of Partial Information Decompositions Using Data from Real and Simulated Layer 5b Pyramidal Cells |
title_short | A Comparison of Partial Information Decompositions Using Data from Real and Simulated Layer 5b Pyramidal Cells |
title_sort | comparison of partial information decompositions using data from real and simulated layer 5b pyramidal cells |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394329/ https://www.ncbi.nlm.nih.gov/pubmed/35893001 http://dx.doi.org/10.3390/e24081021 |
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