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A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks

The search for the chemical origins of life represents a long-standing and continuously debated enigma. Despite its exceptional complexity, in the last decades the field has experienced a revival, also owing to the exponential growth of the computing power allowing for efficiently simulating the beh...

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Autores principales: Amante, Gabriele, Sponer, Judit E., Sponer, Jiri, Saija, Franz, Cassone, Giuseppe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394336/
https://www.ncbi.nlm.nih.gov/pubmed/35892991
http://dx.doi.org/10.3390/e24081012
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author Amante, Gabriele
Sponer, Judit E.
Sponer, Jiri
Saija, Franz
Cassone, Giuseppe
author_facet Amante, Gabriele
Sponer, Judit E.
Sponer, Jiri
Saija, Franz
Cassone, Giuseppe
author_sort Amante, Gabriele
collection PubMed
description The search for the chemical origins of life represents a long-standing and continuously debated enigma. Despite its exceptional complexity, in the last decades the field has experienced a revival, also owing to the exponential growth of the computing power allowing for efficiently simulating the behavior of matter—including its quantum nature—under disparate conditions found, e.g., on the primordial Earth and on Earth-like planetary systems (i.e., exoplanets). In this minireview, we focus on some advanced computational methods capable of efficiently solving the Schrödinger equation at different levels of approximation (i.e., density functional theory)—such as ab initio molecular dynamics—and which are capable to realistically simulate the behavior of matter under the action of energy sources available in prebiotic contexts. In addition, recently developed metadynamics methods coupled with first-principles simulations are here reviewed and exploited to answer to old enigmas and to propose novel scenarios in the exponentially growing research field embedding the study of the chemical origins of life.
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spelling pubmed-93943362022-08-23 A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks Amante, Gabriele Sponer, Judit E. Sponer, Jiri Saija, Franz Cassone, Giuseppe Entropy (Basel) Review The search for the chemical origins of life represents a long-standing and continuously debated enigma. Despite its exceptional complexity, in the last decades the field has experienced a revival, also owing to the exponential growth of the computing power allowing for efficiently simulating the behavior of matter—including its quantum nature—under disparate conditions found, e.g., on the primordial Earth and on Earth-like planetary systems (i.e., exoplanets). In this minireview, we focus on some advanced computational methods capable of efficiently solving the Schrödinger equation at different levels of approximation (i.e., density functional theory)—such as ab initio molecular dynamics—and which are capable to realistically simulate the behavior of matter under the action of energy sources available in prebiotic contexts. In addition, recently developed metadynamics methods coupled with first-principles simulations are here reviewed and exploited to answer to old enigmas and to propose novel scenarios in the exponentially growing research field embedding the study of the chemical origins of life. MDPI 2022-07-22 /pmc/articles/PMC9394336/ /pubmed/35892991 http://dx.doi.org/10.3390/e24081012 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Amante, Gabriele
Sponer, Judit E.
Sponer, Jiri
Saija, Franz
Cassone, Giuseppe
A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks
title A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks
title_full A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks
title_fullStr A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks
title_full_unstemmed A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks
title_short A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks
title_sort computational quantum-based perspective on the molecular origins of life’s building blocks
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394336/
https://www.ncbi.nlm.nih.gov/pubmed/35892991
http://dx.doi.org/10.3390/e24081012
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