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A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks
The search for the chemical origins of life represents a long-standing and continuously debated enigma. Despite its exceptional complexity, in the last decades the field has experienced a revival, also owing to the exponential growth of the computing power allowing for efficiently simulating the beh...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394336/ https://www.ncbi.nlm.nih.gov/pubmed/35892991 http://dx.doi.org/10.3390/e24081012 |
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author | Amante, Gabriele Sponer, Judit E. Sponer, Jiri Saija, Franz Cassone, Giuseppe |
author_facet | Amante, Gabriele Sponer, Judit E. Sponer, Jiri Saija, Franz Cassone, Giuseppe |
author_sort | Amante, Gabriele |
collection | PubMed |
description | The search for the chemical origins of life represents a long-standing and continuously debated enigma. Despite its exceptional complexity, in the last decades the field has experienced a revival, also owing to the exponential growth of the computing power allowing for efficiently simulating the behavior of matter—including its quantum nature—under disparate conditions found, e.g., on the primordial Earth and on Earth-like planetary systems (i.e., exoplanets). In this minireview, we focus on some advanced computational methods capable of efficiently solving the Schrödinger equation at different levels of approximation (i.e., density functional theory)—such as ab initio molecular dynamics—and which are capable to realistically simulate the behavior of matter under the action of energy sources available in prebiotic contexts. In addition, recently developed metadynamics methods coupled with first-principles simulations are here reviewed and exploited to answer to old enigmas and to propose novel scenarios in the exponentially growing research field embedding the study of the chemical origins of life. |
format | Online Article Text |
id | pubmed-9394336 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93943362022-08-23 A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks Amante, Gabriele Sponer, Judit E. Sponer, Jiri Saija, Franz Cassone, Giuseppe Entropy (Basel) Review The search for the chemical origins of life represents a long-standing and continuously debated enigma. Despite its exceptional complexity, in the last decades the field has experienced a revival, also owing to the exponential growth of the computing power allowing for efficiently simulating the behavior of matter—including its quantum nature—under disparate conditions found, e.g., on the primordial Earth and on Earth-like planetary systems (i.e., exoplanets). In this minireview, we focus on some advanced computational methods capable of efficiently solving the Schrödinger equation at different levels of approximation (i.e., density functional theory)—such as ab initio molecular dynamics—and which are capable to realistically simulate the behavior of matter under the action of energy sources available in prebiotic contexts. In addition, recently developed metadynamics methods coupled with first-principles simulations are here reviewed and exploited to answer to old enigmas and to propose novel scenarios in the exponentially growing research field embedding the study of the chemical origins of life. MDPI 2022-07-22 /pmc/articles/PMC9394336/ /pubmed/35892991 http://dx.doi.org/10.3390/e24081012 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Amante, Gabriele Sponer, Judit E. Sponer, Jiri Saija, Franz Cassone, Giuseppe A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks |
title | A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks |
title_full | A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks |
title_fullStr | A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks |
title_full_unstemmed | A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks |
title_short | A Computational Quantum-Based Perspective on the Molecular Origins of Life’s Building Blocks |
title_sort | computational quantum-based perspective on the molecular origins of life’s building blocks |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394336/ https://www.ncbi.nlm.nih.gov/pubmed/35892991 http://dx.doi.org/10.3390/e24081012 |
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