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Interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study
BACKGROUND: Currently, the clinical prediction model for patients with osteosarcoma was almost developed from single-center data, lacking external validation. Due to their low reliability and low predictive power, there were few clinical applications. Our study aimed to set up a clinical prediction...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394445/ https://www.ncbi.nlm.nih.gov/pubmed/36003782 http://dx.doi.org/10.3389/fonc.2022.945362 |
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author | Li, Wenle Jin, Genyang Wu, Huitao Wu, Rilige Xu, Chan Wang, Bing Liu, Qiang Hu, Zhaohui Wang, Haosheng Dong, Shengtao Tang, Zhi-Ri Peng, Haiwen Zhao, Wei Yin, Chengliang |
author_facet | Li, Wenle Jin, Genyang Wu, Huitao Wu, Rilige Xu, Chan Wang, Bing Liu, Qiang Hu, Zhaohui Wang, Haosheng Dong, Shengtao Tang, Zhi-Ri Peng, Haiwen Zhao, Wei Yin, Chengliang |
author_sort | Li, Wenle |
collection | PubMed |
description | BACKGROUND: Currently, the clinical prediction model for patients with osteosarcoma was almost developed from single-center data, lacking external validation. Due to their low reliability and low predictive power, there were few clinical applications. Our study aimed to set up a clinical prediction model with stronger predictive ability, credibility, and clinical application value for osteosarcoma. METHODS: Clinical information related to osteosarcoma patients from 2010 to 2016 was collected in the SEER database and four different Chinese medical centers. Factors were screened using three models (full subset regression, univariate Cox, and LASSO) via minimum AIC and maximum AUC values in the SEER database. The model was selected by the strongest predictive power and visualized by three statistical methods: nomogram, web calculator, and decision tree. The model was further externally validated and evaluated for its clinical utility in data from four medical centers. RESULTS: Eight predicting factors, namely, age, grade, laterality, stage M, surgery, bone metastases, lung metastases, and tumor size, were selected from the model based on the minimum AIC and maximum AUC value. The internal and external validation results showed that the model possessed good consistency. ROC curves revealed good predictive ability (AUC > 0.8 in both internal and external validation). The DCA results demonstrated that the model had an excellent clinical predicted utility in 3 years and 5 years for North American and Chinese patients. CONCLUSIONS: The clinical prediction model was built and visualized in this study, including a nomogram and a web calculator (https://dr-lee.shinyapps.io/osteosarcoma/), which indicated very good consistency, predictive power, and clinical application value. |
format | Online Article Text |
id | pubmed-9394445 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93944452022-08-23 Interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study Li, Wenle Jin, Genyang Wu, Huitao Wu, Rilige Xu, Chan Wang, Bing Liu, Qiang Hu, Zhaohui Wang, Haosheng Dong, Shengtao Tang, Zhi-Ri Peng, Haiwen Zhao, Wei Yin, Chengliang Front Oncol Oncology BACKGROUND: Currently, the clinical prediction model for patients with osteosarcoma was almost developed from single-center data, lacking external validation. Due to their low reliability and low predictive power, there were few clinical applications. Our study aimed to set up a clinical prediction model with stronger predictive ability, credibility, and clinical application value for osteosarcoma. METHODS: Clinical information related to osteosarcoma patients from 2010 to 2016 was collected in the SEER database and four different Chinese medical centers. Factors were screened using three models (full subset regression, univariate Cox, and LASSO) via minimum AIC and maximum AUC values in the SEER database. The model was selected by the strongest predictive power and visualized by three statistical methods: nomogram, web calculator, and decision tree. The model was further externally validated and evaluated for its clinical utility in data from four medical centers. RESULTS: Eight predicting factors, namely, age, grade, laterality, stage M, surgery, bone metastases, lung metastases, and tumor size, were selected from the model based on the minimum AIC and maximum AUC value. The internal and external validation results showed that the model possessed good consistency. ROC curves revealed good predictive ability (AUC > 0.8 in both internal and external validation). The DCA results demonstrated that the model had an excellent clinical predicted utility in 3 years and 5 years for North American and Chinese patients. CONCLUSIONS: The clinical prediction model was built and visualized in this study, including a nomogram and a web calculator (https://dr-lee.shinyapps.io/osteosarcoma/), which indicated very good consistency, predictive power, and clinical application value. Frontiers Media S.A. 2022-08-02 /pmc/articles/PMC9394445/ /pubmed/36003782 http://dx.doi.org/10.3389/fonc.2022.945362 Text en Copyright © 2022 Li, Jin, Wu, Wu, Xu, Wang, Liu, Hu, Wang, Dong, Tang, Peng, Zhao and Yin https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Li, Wenle Jin, Genyang Wu, Huitao Wu, Rilige Xu, Chan Wang, Bing Liu, Qiang Hu, Zhaohui Wang, Haosheng Dong, Shengtao Tang, Zhi-Ri Peng, Haiwen Zhao, Wei Yin, Chengliang Interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study |
title | Interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study |
title_full | Interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study |
title_fullStr | Interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study |
title_full_unstemmed | Interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study |
title_short | Interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study |
title_sort | interpretable clinical visualization model for prediction of prognosis in osteosarcoma: a large cohort data study |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394445/ https://www.ncbi.nlm.nih.gov/pubmed/36003782 http://dx.doi.org/10.3389/fonc.2022.945362 |
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