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Atrous residual convolutional neural network based on U-Net for retinal vessel segmentation

Extracting features of retinal vessels from fundus images plays an essential role in computer-aided diagnosis of diseases, such as diabetes, hypertension, and cerebrovascular diseases. Although a number of deep learning-based methods have been used in this field, the accuracy of retinal vessel segme...

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Detalles Bibliográficos
Autores principales: Wu, Jin, Liu, Yong, Zhu, Yuanpei, Li, Zun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394801/
https://www.ncbi.nlm.nih.gov/pubmed/35994494
http://dx.doi.org/10.1371/journal.pone.0273318
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author Wu, Jin
Liu, Yong
Zhu, Yuanpei
Li, Zun
author_facet Wu, Jin
Liu, Yong
Zhu, Yuanpei
Li, Zun
author_sort Wu, Jin
collection PubMed
description Extracting features of retinal vessels from fundus images plays an essential role in computer-aided diagnosis of diseases, such as diabetes, hypertension, and cerebrovascular diseases. Although a number of deep learning-based methods have been used in this field, the accuracy of retinal vessel segmentation remains challenging due to limited densely annotated data, inter-vessel differences, and structured prediction problems, especially in areas of small blood vessels and the optic disk. In this paper, we propose an ARN model with a atrous block to address these issues, which can avoid the loss of data structure, and enlarge the receptive field, so that each convolution output contains a larger range of information. In addition, we also introduce residual convolution network to increase the network depth and improve the network performance.Some key parameters are used to measure the feasibility of the model, such as sensitivity (Se), specificity (Sp), F1-score (F1), accuracy (Acc), and area under each curve (AUC). Experimental results on two benchmark datasets demonstrate the effectiveness of the proposed methods, which accuracy are 0.9686 on the DRIVE and 0.9746 on the CHASE DB1. The segmentation structure can assist the doctor in diagnosis more effectively.
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spelling pubmed-93948012022-08-23 Atrous residual convolutional neural network based on U-Net for retinal vessel segmentation Wu, Jin Liu, Yong Zhu, Yuanpei Li, Zun PLoS One Research Article Extracting features of retinal vessels from fundus images plays an essential role in computer-aided diagnosis of diseases, such as diabetes, hypertension, and cerebrovascular diseases. Although a number of deep learning-based methods have been used in this field, the accuracy of retinal vessel segmentation remains challenging due to limited densely annotated data, inter-vessel differences, and structured prediction problems, especially in areas of small blood vessels and the optic disk. In this paper, we propose an ARN model with a atrous block to address these issues, which can avoid the loss of data structure, and enlarge the receptive field, so that each convolution output contains a larger range of information. In addition, we also introduce residual convolution network to increase the network depth and improve the network performance.Some key parameters are used to measure the feasibility of the model, such as sensitivity (Se), specificity (Sp), F1-score (F1), accuracy (Acc), and area under each curve (AUC). Experimental results on two benchmark datasets demonstrate the effectiveness of the proposed methods, which accuracy are 0.9686 on the DRIVE and 0.9746 on the CHASE DB1. The segmentation structure can assist the doctor in diagnosis more effectively. Public Library of Science 2022-08-22 /pmc/articles/PMC9394801/ /pubmed/35994494 http://dx.doi.org/10.1371/journal.pone.0273318 Text en © 2022 Wu et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Wu, Jin
Liu, Yong
Zhu, Yuanpei
Li, Zun
Atrous residual convolutional neural network based on U-Net for retinal vessel segmentation
title Atrous residual convolutional neural network based on U-Net for retinal vessel segmentation
title_full Atrous residual convolutional neural network based on U-Net for retinal vessel segmentation
title_fullStr Atrous residual convolutional neural network based on U-Net for retinal vessel segmentation
title_full_unstemmed Atrous residual convolutional neural network based on U-Net for retinal vessel segmentation
title_short Atrous residual convolutional neural network based on U-Net for retinal vessel segmentation
title_sort atrous residual convolutional neural network based on u-net for retinal vessel segmentation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9394801/
https://www.ncbi.nlm.nih.gov/pubmed/35994494
http://dx.doi.org/10.1371/journal.pone.0273318
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