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Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering

Muconic acid is a bioprivileged molecule that can be converted into direct replacement chemicals for incumbent petrochemicals and performance-advantaged bioproducts. In this study, Pseudomonas putida KT2440 is engineered to convert glucose and xylose, the primary carbohydrates in lignocellulosic hyd...

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Autores principales: Ling, Chen, Peabody, George L., Salvachúa, Davinia, Kim, Young-Mo, Kneucker, Colin M., Calvey, Christopher H., Monninger, Michela A., Munoz, Nathalie Munoz, Poirier, Brenton C., Ramirez, Kelsey J., St. John, Peter C., Woodworth, Sean P., Magnuson, Jon K., Burnum-Johnson, Kristin E., Guss, Adam M., Johnson, Christopher W., Beckham, Gregg T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9395534/
https://www.ncbi.nlm.nih.gov/pubmed/35995792
http://dx.doi.org/10.1038/s41467-022-32296-y
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author Ling, Chen
Peabody, George L.
Salvachúa, Davinia
Kim, Young-Mo
Kneucker, Colin M.
Calvey, Christopher H.
Monninger, Michela A.
Munoz, Nathalie Munoz
Poirier, Brenton C.
Ramirez, Kelsey J.
St. John, Peter C.
Woodworth, Sean P.
Magnuson, Jon K.
Burnum-Johnson, Kristin E.
Guss, Adam M.
Johnson, Christopher W.
Beckham, Gregg T.
author_facet Ling, Chen
Peabody, George L.
Salvachúa, Davinia
Kim, Young-Mo
Kneucker, Colin M.
Calvey, Christopher H.
Monninger, Michela A.
Munoz, Nathalie Munoz
Poirier, Brenton C.
Ramirez, Kelsey J.
St. John, Peter C.
Woodworth, Sean P.
Magnuson, Jon K.
Burnum-Johnson, Kristin E.
Guss, Adam M.
Johnson, Christopher W.
Beckham, Gregg T.
author_sort Ling, Chen
collection PubMed
description Muconic acid is a bioprivileged molecule that can be converted into direct replacement chemicals for incumbent petrochemicals and performance-advantaged bioproducts. In this study, Pseudomonas putida KT2440 is engineered to convert glucose and xylose, the primary carbohydrates in lignocellulosic hydrolysates, to muconic acid using a model-guided strategy to maximize the theoretical yield. Using adaptive laboratory evolution (ALE) and metabolic engineering in a strain engineered to express the D-xylose isomerase pathway, we demonstrate that mutations in the heterologous D-xylose:H(+) symporter (XylE), increased expression of a major facilitator superfamily transporter (PP_2569), and overexpression of aroB encoding the native 3-dehydroquinate synthase, enable efficient muconic acid production from glucose and xylose simultaneously. Using the rationally engineered strain, we produce 33.7 g L(−1) muconate at 0.18 g L(−1) h(−1) and a 46% molar yield (92% of the maximum theoretical yield). This engineering strategy is promising for the production of other shikimate pathway-derived compounds from lignocellulosic sugars.
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spelling pubmed-93955342022-08-24 Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering Ling, Chen Peabody, George L. Salvachúa, Davinia Kim, Young-Mo Kneucker, Colin M. Calvey, Christopher H. Monninger, Michela A. Munoz, Nathalie Munoz Poirier, Brenton C. Ramirez, Kelsey J. St. John, Peter C. Woodworth, Sean P. Magnuson, Jon K. Burnum-Johnson, Kristin E. Guss, Adam M. Johnson, Christopher W. Beckham, Gregg T. Nat Commun Article Muconic acid is a bioprivileged molecule that can be converted into direct replacement chemicals for incumbent petrochemicals and performance-advantaged bioproducts. In this study, Pseudomonas putida KT2440 is engineered to convert glucose and xylose, the primary carbohydrates in lignocellulosic hydrolysates, to muconic acid using a model-guided strategy to maximize the theoretical yield. Using adaptive laboratory evolution (ALE) and metabolic engineering in a strain engineered to express the D-xylose isomerase pathway, we demonstrate that mutations in the heterologous D-xylose:H(+) symporter (XylE), increased expression of a major facilitator superfamily transporter (PP_2569), and overexpression of aroB encoding the native 3-dehydroquinate synthase, enable efficient muconic acid production from glucose and xylose simultaneously. Using the rationally engineered strain, we produce 33.7 g L(−1) muconate at 0.18 g L(−1) h(−1) and a 46% molar yield (92% of the maximum theoretical yield). This engineering strategy is promising for the production of other shikimate pathway-derived compounds from lignocellulosic sugars. Nature Publishing Group UK 2022-08-22 /pmc/articles/PMC9395534/ /pubmed/35995792 http://dx.doi.org/10.1038/s41467-022-32296-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ling, Chen
Peabody, George L.
Salvachúa, Davinia
Kim, Young-Mo
Kneucker, Colin M.
Calvey, Christopher H.
Monninger, Michela A.
Munoz, Nathalie Munoz
Poirier, Brenton C.
Ramirez, Kelsey J.
St. John, Peter C.
Woodworth, Sean P.
Magnuson, Jon K.
Burnum-Johnson, Kristin E.
Guss, Adam M.
Johnson, Christopher W.
Beckham, Gregg T.
Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering
title Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering
title_full Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering
title_fullStr Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering
title_full_unstemmed Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering
title_short Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering
title_sort muconic acid production from glucose and xylose in pseudomonas putida via evolution and metabolic engineering
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9395534/
https://www.ncbi.nlm.nih.gov/pubmed/35995792
http://dx.doi.org/10.1038/s41467-022-32296-y
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