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A K-nearest Neighbor Model to Predict Early Recurrence of Hepatocellular Carcinoma After Resection
BACKGROUND AND AIMS: Patients with hepatocellular carcinoma (HCC) surgically resected are at risk of recurrence; however, the risk factors of recurrence remain poorly understood. This study intended to establish a novel machine learning model based on clinical data for predicting early recurrence of...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
XIA & HE Publishing Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9396318/ https://www.ncbi.nlm.nih.gov/pubmed/36062279 http://dx.doi.org/10.14218/JCTH.2021.00348 |
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author | Liu, Chuanli Yang, Hongli Feng, Yuemin Liu, Cuihong Rui, Fajuan Cao, Yuankui Hu, Xinyu Xu, Jiawen Fan, Junqing Zhu, Qiang Li, Jie |
author_facet | Liu, Chuanli Yang, Hongli Feng, Yuemin Liu, Cuihong Rui, Fajuan Cao, Yuankui Hu, Xinyu Xu, Jiawen Fan, Junqing Zhu, Qiang Li, Jie |
author_sort | Liu, Chuanli |
collection | PubMed |
description | BACKGROUND AND AIMS: Patients with hepatocellular carcinoma (HCC) surgically resected are at risk of recurrence; however, the risk factors of recurrence remain poorly understood. This study intended to establish a novel machine learning model based on clinical data for predicting early recurrence of HCC after resection. METHODS: A total of 220 HCC patients who underwent resection were enrolled. Classification machine learning models were developed to predict HCC recurrence. The standard deviation, recall, and precision of the model were used to assess the model’s accuracy and identify efficiency of the model. RESULTS: Recurrent HCC developed in 89 (40.45%) patients at a median time of 14 months from primary resection. In principal component analysis, tumor size, tumor grade differentiation, portal vein tumor thrombus, alpha-fetoprotein, protein induced by vitamin K absence or antagonist-II (PIVKA-II), aspartate aminotransferase, platelet count, white blood cell count, and HBsAg were positive prognostic factors of HCC recurrence and were included in the preoperative model. After comparing different machine learning methods, including logistic regression, decision tree, naïve Bayes, deep neural networks, and k-nearest neighbor (K-NN), we choose the K-NN model as the optimal prediction model. The accuracy, recall, precision of the K-NN model were 70.6%, 51.9%, 70.1%, respectively. The standard deviation was 0.020. CONCLUSIONS: The K-NN classification algorithm model performed better than the other classification models. Estimation of the recurrence rate of early HCC can help to allocate treatment, eventually achieving safe oncological outcomes. |
format | Online Article Text |
id | pubmed-9396318 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | XIA & HE Publishing Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93963182022-09-02 A K-nearest Neighbor Model to Predict Early Recurrence of Hepatocellular Carcinoma After Resection Liu, Chuanli Yang, Hongli Feng, Yuemin Liu, Cuihong Rui, Fajuan Cao, Yuankui Hu, Xinyu Xu, Jiawen Fan, Junqing Zhu, Qiang Li, Jie J Clin Transl Hepatol Original Article BACKGROUND AND AIMS: Patients with hepatocellular carcinoma (HCC) surgically resected are at risk of recurrence; however, the risk factors of recurrence remain poorly understood. This study intended to establish a novel machine learning model based on clinical data for predicting early recurrence of HCC after resection. METHODS: A total of 220 HCC patients who underwent resection were enrolled. Classification machine learning models were developed to predict HCC recurrence. The standard deviation, recall, and precision of the model were used to assess the model’s accuracy and identify efficiency of the model. RESULTS: Recurrent HCC developed in 89 (40.45%) patients at a median time of 14 months from primary resection. In principal component analysis, tumor size, tumor grade differentiation, portal vein tumor thrombus, alpha-fetoprotein, protein induced by vitamin K absence or antagonist-II (PIVKA-II), aspartate aminotransferase, platelet count, white blood cell count, and HBsAg were positive prognostic factors of HCC recurrence and were included in the preoperative model. After comparing different machine learning methods, including logistic regression, decision tree, naïve Bayes, deep neural networks, and k-nearest neighbor (K-NN), we choose the K-NN model as the optimal prediction model. The accuracy, recall, precision of the K-NN model were 70.6%, 51.9%, 70.1%, respectively. The standard deviation was 0.020. CONCLUSIONS: The K-NN classification algorithm model performed better than the other classification models. Estimation of the recurrence rate of early HCC can help to allocate treatment, eventually achieving safe oncological outcomes. XIA & HE Publishing Inc. 2022-08-28 2022-01-04 /pmc/articles/PMC9396318/ /pubmed/36062279 http://dx.doi.org/10.14218/JCTH.2021.00348 Text en © 2022 Authors. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0), permitting all non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Liu, Chuanli Yang, Hongli Feng, Yuemin Liu, Cuihong Rui, Fajuan Cao, Yuankui Hu, Xinyu Xu, Jiawen Fan, Junqing Zhu, Qiang Li, Jie A K-nearest Neighbor Model to Predict Early Recurrence of Hepatocellular Carcinoma After Resection |
title | A K-nearest Neighbor Model to Predict Early Recurrence of Hepatocellular Carcinoma After Resection |
title_full | A K-nearest Neighbor Model to Predict Early Recurrence of Hepatocellular Carcinoma After Resection |
title_fullStr | A K-nearest Neighbor Model to Predict Early Recurrence of Hepatocellular Carcinoma After Resection |
title_full_unstemmed | A K-nearest Neighbor Model to Predict Early Recurrence of Hepatocellular Carcinoma After Resection |
title_short | A K-nearest Neighbor Model to Predict Early Recurrence of Hepatocellular Carcinoma After Resection |
title_sort | k-nearest neighbor model to predict early recurrence of hepatocellular carcinoma after resection |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9396318/ https://www.ncbi.nlm.nih.gov/pubmed/36062279 http://dx.doi.org/10.14218/JCTH.2021.00348 |
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