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Standardization of Synthetic Biology Tools and Assembly Methods for Saccharomyces cerevisiae and Emerging Yeast Species

[Image: see text] As redesigning organisms using engineering principles is one of the purposes of synthetic biology (SynBio), the standardization of experimental methods and DNA parts is becoming increasingly a necessity. The synthetic biology community focusing on the engineering of Saccharomyces c...

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Detalles Bibliográficos
Autores principales: Malcı, Koray, Watts, Emma, Roberts, Tania Michelle, Auxillos, Jamie Yam, Nowrouzi, Behnaz, Boll, Heloísa Oss, Nascimento, Cibele Zolnier Sousa do, Andreou, Andreas, Vegh, Peter, Donovan, Sophie, Fragkoudis, Rennos, Panke, Sven, Wallace, Edward, Elfick, Alistair, Rios-Solis, Leonardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9396660/
https://www.ncbi.nlm.nih.gov/pubmed/35939789
http://dx.doi.org/10.1021/acssynbio.1c00442
Descripción
Sumario:[Image: see text] As redesigning organisms using engineering principles is one of the purposes of synthetic biology (SynBio), the standardization of experimental methods and DNA parts is becoming increasingly a necessity. The synthetic biology community focusing on the engineering of Saccharomyces cerevisiae has been in the foreground in this area, conceiving several well-characterized SynBio toolkits widely adopted by the community. In this review, the molecular methods and toolkits developed for S. cerevisiae are discussed in terms of their contributions to the required standardization efforts. In addition, the toolkits designed for emerging nonconventional yeast species including Yarrowia lipolytica, Komagataella phaffii, and Kluyveromyces marxianus are also reviewed. Without a doubt, the characterized DNA parts combined with the standardized assembly strategies highlighted in these toolkits have greatly contributed to the rapid development of many metabolic engineering and diagnostics applications among others. Despite the growing capacity in deploying synthetic biology for common yeast genome engineering works, the yeast community has a long journey to go to exploit it in more sophisticated and delicate applications like bioautomation.