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Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea

Chickpea production is vulnerable to drought stress. Identifying the genetic components underlying drought adaptation is crucial for enhancing chickpea productivity. Here, we present the fine mapping and characterization of ‘QTL‐hotspot’, a genomic region controlling chickpea growth with positive co...

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Autores principales: Barmukh, Rutwik, Roorkiwal, Manish, Garg, Vanika, Khan, Aamir W., German, Liam, Jaganathan, Deepa, Chitikineni, Annapurna, Kholova, Jana, Kudapa, Himabindu, Sivasakthi, Kaliamoorthy, Samineni, Srinivasan, Kale, Sandip M., Gaur, Pooran M., Sagurthi, Someswar Rao, Benitez‐Alfonso, Yoselin, Varshney, Rajeev K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9398337/
https://www.ncbi.nlm.nih.gov/pubmed/35534989
http://dx.doi.org/10.1111/pbi.13840
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author Barmukh, Rutwik
Roorkiwal, Manish
Garg, Vanika
Khan, Aamir W.
German, Liam
Jaganathan, Deepa
Chitikineni, Annapurna
Kholova, Jana
Kudapa, Himabindu
Sivasakthi, Kaliamoorthy
Samineni, Srinivasan
Kale, Sandip M.
Gaur, Pooran M.
Sagurthi, Someswar Rao
Benitez‐Alfonso, Yoselin
Varshney, Rajeev K.
author_facet Barmukh, Rutwik
Roorkiwal, Manish
Garg, Vanika
Khan, Aamir W.
German, Liam
Jaganathan, Deepa
Chitikineni, Annapurna
Kholova, Jana
Kudapa, Himabindu
Sivasakthi, Kaliamoorthy
Samineni, Srinivasan
Kale, Sandip M.
Gaur, Pooran M.
Sagurthi, Someswar Rao
Benitez‐Alfonso, Yoselin
Varshney, Rajeev K.
author_sort Barmukh, Rutwik
collection PubMed
description Chickpea production is vulnerable to drought stress. Identifying the genetic components underlying drought adaptation is crucial for enhancing chickpea productivity. Here, we present the fine mapping and characterization of ‘QTL‐hotspot’, a genomic region controlling chickpea growth with positive consequences on crop production under drought. We report that a non‐synonymous substitution in the transcription factor CaTIFY4b regulates seed weight and organ size in chickpea. Ectopic expression of CaTIFY4b in Medicago truncatula enhances root growth under water deficit. Our results suggest that allelic variation in ‘QTL‐hotspot’ improves pre‐anthesis water use, transpiration efficiency, root architecture and canopy development, enabling high‐yield performance under terminal drought conditions. Gene expression analysis indicated that CaTIFY4b may regulate organ size under water deficit by modulating the expression of GRF‐INTERACTING FACTOR1 (GIF1), a transcriptional co‐activator of Growth‐Regulating Factors. Taken together, our study offers new insights into the role of CaTIFY4b and on diverse physiological and molecular mechanisms underpinning chickpea growth and production under specific drought scenarios.
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spelling pubmed-93983372022-08-26 Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea Barmukh, Rutwik Roorkiwal, Manish Garg, Vanika Khan, Aamir W. German, Liam Jaganathan, Deepa Chitikineni, Annapurna Kholova, Jana Kudapa, Himabindu Sivasakthi, Kaliamoorthy Samineni, Srinivasan Kale, Sandip M. Gaur, Pooran M. Sagurthi, Someswar Rao Benitez‐Alfonso, Yoselin Varshney, Rajeev K. Plant Biotechnol J Research Articles Chickpea production is vulnerable to drought stress. Identifying the genetic components underlying drought adaptation is crucial for enhancing chickpea productivity. Here, we present the fine mapping and characterization of ‘QTL‐hotspot’, a genomic region controlling chickpea growth with positive consequences on crop production under drought. We report that a non‐synonymous substitution in the transcription factor CaTIFY4b regulates seed weight and organ size in chickpea. Ectopic expression of CaTIFY4b in Medicago truncatula enhances root growth under water deficit. Our results suggest that allelic variation in ‘QTL‐hotspot’ improves pre‐anthesis water use, transpiration efficiency, root architecture and canopy development, enabling high‐yield performance under terminal drought conditions. Gene expression analysis indicated that CaTIFY4b may regulate organ size under water deficit by modulating the expression of GRF‐INTERACTING FACTOR1 (GIF1), a transcriptional co‐activator of Growth‐Regulating Factors. Taken together, our study offers new insights into the role of CaTIFY4b and on diverse physiological and molecular mechanisms underpinning chickpea growth and production under specific drought scenarios. John Wiley and Sons Inc. 2022-05-21 2022-09 /pmc/articles/PMC9398337/ /pubmed/35534989 http://dx.doi.org/10.1111/pbi.13840 Text en © 2022 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Barmukh, Rutwik
Roorkiwal, Manish
Garg, Vanika
Khan, Aamir W.
German, Liam
Jaganathan, Deepa
Chitikineni, Annapurna
Kholova, Jana
Kudapa, Himabindu
Sivasakthi, Kaliamoorthy
Samineni, Srinivasan
Kale, Sandip M.
Gaur, Pooran M.
Sagurthi, Someswar Rao
Benitez‐Alfonso, Yoselin
Varshney, Rajeev K.
Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea
title Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea
title_full Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea
title_fullStr Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea
title_full_unstemmed Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea
title_short Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea
title_sort genetic variation in catify4b contributes to drought adaptation in chickpea
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9398337/
https://www.ncbi.nlm.nih.gov/pubmed/35534989
http://dx.doi.org/10.1111/pbi.13840
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