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Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea
Chickpea production is vulnerable to drought stress. Identifying the genetic components underlying drought adaptation is crucial for enhancing chickpea productivity. Here, we present the fine mapping and characterization of ‘QTL‐hotspot’, a genomic region controlling chickpea growth with positive co...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9398337/ https://www.ncbi.nlm.nih.gov/pubmed/35534989 http://dx.doi.org/10.1111/pbi.13840 |
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author | Barmukh, Rutwik Roorkiwal, Manish Garg, Vanika Khan, Aamir W. German, Liam Jaganathan, Deepa Chitikineni, Annapurna Kholova, Jana Kudapa, Himabindu Sivasakthi, Kaliamoorthy Samineni, Srinivasan Kale, Sandip M. Gaur, Pooran M. Sagurthi, Someswar Rao Benitez‐Alfonso, Yoselin Varshney, Rajeev K. |
author_facet | Barmukh, Rutwik Roorkiwal, Manish Garg, Vanika Khan, Aamir W. German, Liam Jaganathan, Deepa Chitikineni, Annapurna Kholova, Jana Kudapa, Himabindu Sivasakthi, Kaliamoorthy Samineni, Srinivasan Kale, Sandip M. Gaur, Pooran M. Sagurthi, Someswar Rao Benitez‐Alfonso, Yoselin Varshney, Rajeev K. |
author_sort | Barmukh, Rutwik |
collection | PubMed |
description | Chickpea production is vulnerable to drought stress. Identifying the genetic components underlying drought adaptation is crucial for enhancing chickpea productivity. Here, we present the fine mapping and characterization of ‘QTL‐hotspot’, a genomic region controlling chickpea growth with positive consequences on crop production under drought. We report that a non‐synonymous substitution in the transcription factor CaTIFY4b regulates seed weight and organ size in chickpea. Ectopic expression of CaTIFY4b in Medicago truncatula enhances root growth under water deficit. Our results suggest that allelic variation in ‘QTL‐hotspot’ improves pre‐anthesis water use, transpiration efficiency, root architecture and canopy development, enabling high‐yield performance under terminal drought conditions. Gene expression analysis indicated that CaTIFY4b may regulate organ size under water deficit by modulating the expression of GRF‐INTERACTING FACTOR1 (GIF1), a transcriptional co‐activator of Growth‐Regulating Factors. Taken together, our study offers new insights into the role of CaTIFY4b and on diverse physiological and molecular mechanisms underpinning chickpea growth and production under specific drought scenarios. |
format | Online Article Text |
id | pubmed-9398337 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93983372022-08-26 Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea Barmukh, Rutwik Roorkiwal, Manish Garg, Vanika Khan, Aamir W. German, Liam Jaganathan, Deepa Chitikineni, Annapurna Kholova, Jana Kudapa, Himabindu Sivasakthi, Kaliamoorthy Samineni, Srinivasan Kale, Sandip M. Gaur, Pooran M. Sagurthi, Someswar Rao Benitez‐Alfonso, Yoselin Varshney, Rajeev K. Plant Biotechnol J Research Articles Chickpea production is vulnerable to drought stress. Identifying the genetic components underlying drought adaptation is crucial for enhancing chickpea productivity. Here, we present the fine mapping and characterization of ‘QTL‐hotspot’, a genomic region controlling chickpea growth with positive consequences on crop production under drought. We report that a non‐synonymous substitution in the transcription factor CaTIFY4b regulates seed weight and organ size in chickpea. Ectopic expression of CaTIFY4b in Medicago truncatula enhances root growth under water deficit. Our results suggest that allelic variation in ‘QTL‐hotspot’ improves pre‐anthesis water use, transpiration efficiency, root architecture and canopy development, enabling high‐yield performance under terminal drought conditions. Gene expression analysis indicated that CaTIFY4b may regulate organ size under water deficit by modulating the expression of GRF‐INTERACTING FACTOR1 (GIF1), a transcriptional co‐activator of Growth‐Regulating Factors. Taken together, our study offers new insights into the role of CaTIFY4b and on diverse physiological and molecular mechanisms underpinning chickpea growth and production under specific drought scenarios. John Wiley and Sons Inc. 2022-05-21 2022-09 /pmc/articles/PMC9398337/ /pubmed/35534989 http://dx.doi.org/10.1111/pbi.13840 Text en © 2022 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Barmukh, Rutwik Roorkiwal, Manish Garg, Vanika Khan, Aamir W. German, Liam Jaganathan, Deepa Chitikineni, Annapurna Kholova, Jana Kudapa, Himabindu Sivasakthi, Kaliamoorthy Samineni, Srinivasan Kale, Sandip M. Gaur, Pooran M. Sagurthi, Someswar Rao Benitez‐Alfonso, Yoselin Varshney, Rajeev K. Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea |
title | Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea |
title_full | Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea |
title_fullStr | Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea |
title_full_unstemmed | Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea |
title_short | Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea |
title_sort | genetic variation in catify4b contributes to drought adaptation in chickpea |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9398337/ https://www.ncbi.nlm.nih.gov/pubmed/35534989 http://dx.doi.org/10.1111/pbi.13840 |
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