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Nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay

Magnetic nanoparticles (MNPs) can be quantified based on their magnetic relaxation properties by volumetric magnetic biosensing strategies, for example, alternating current susceptometry. Volume-amplified magnetic nanoparticle detection assays (VAMNDAs) employ analyte-initiated nucleic acid amplific...

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Autores principales: Huang, Zhongchao, Li, Jing, Zhong, Hongwen, Tian, Bo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9399362/
https://www.ncbi.nlm.nih.gov/pubmed/36032733
http://dx.doi.org/10.3389/fbioe.2022.939807
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author Huang, Zhongchao
Li, Jing
Zhong, Hongwen
Tian, Bo
author_facet Huang, Zhongchao
Li, Jing
Zhong, Hongwen
Tian, Bo
author_sort Huang, Zhongchao
collection PubMed
description Magnetic nanoparticles (MNPs) can be quantified based on their magnetic relaxation properties by volumetric magnetic biosensing strategies, for example, alternating current susceptometry. Volume-amplified magnetic nanoparticle detection assays (VAMNDAs) employ analyte-initiated nucleic acid amplification (NAA) reactions to increase the hydrodynamic size of MNP labels for magnetic sensing, achieving attomolar to picomolar detection limits. VAMNDAs offer rapid and user-friendly analysis of nucleic acid targets but present inherence defects determined by the chosen amplification reactions and sensing principles. In this mini-review, we summarize more than 30 VAMNDA publications and classify their detection models for NAA-induced MNP size increases, highlighting the performances of different linear, cascade, and exponential NAA strategies. For some NAA strategies that have not yet been reported in VAMNDA, we predicted their performances based on the reaction kinetics and feasible detection models. Finally, challenges and perspectives are given, which may hopefully inspire and guide future VAMNDA studies.
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spelling pubmed-93993622022-08-25 Nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay Huang, Zhongchao Li, Jing Zhong, Hongwen Tian, Bo Front Bioeng Biotechnol Bioengineering and Biotechnology Magnetic nanoparticles (MNPs) can be quantified based on their magnetic relaxation properties by volumetric magnetic biosensing strategies, for example, alternating current susceptometry. Volume-amplified magnetic nanoparticle detection assays (VAMNDAs) employ analyte-initiated nucleic acid amplification (NAA) reactions to increase the hydrodynamic size of MNP labels for magnetic sensing, achieving attomolar to picomolar detection limits. VAMNDAs offer rapid and user-friendly analysis of nucleic acid targets but present inherence defects determined by the chosen amplification reactions and sensing principles. In this mini-review, we summarize more than 30 VAMNDA publications and classify their detection models for NAA-induced MNP size increases, highlighting the performances of different linear, cascade, and exponential NAA strategies. For some NAA strategies that have not yet been reported in VAMNDA, we predicted their performances based on the reaction kinetics and feasible detection models. Finally, challenges and perspectives are given, which may hopefully inspire and guide future VAMNDA studies. Frontiers Media S.A. 2022-08-10 /pmc/articles/PMC9399362/ /pubmed/36032733 http://dx.doi.org/10.3389/fbioe.2022.939807 Text en Copyright © 2022 Huang, Li, Zhong and Tian. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Huang, Zhongchao
Li, Jing
Zhong, Hongwen
Tian, Bo
Nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay
title Nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay
title_full Nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay
title_fullStr Nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay
title_full_unstemmed Nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay
title_short Nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay
title_sort nucleic acid amplification strategies for volume-amplified magnetic nanoparticle detection assay
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9399362/
https://www.ncbi.nlm.nih.gov/pubmed/36032733
http://dx.doi.org/10.3389/fbioe.2022.939807
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