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The Impact of Activity‐Based Protein Profiling in Malaria Drug Discovery

Activity‐based protein profiling (ABPP) is an approach used at the interface of chemical biology and proteomics that uses small molecular probes to provide dynamic fingerprints of enzymatic activity in complex proteomes. Malaria is a disease caused by Plasmodium parasites with a significant death bu...

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Autores principales: Carvalho, Luís A. R., Bernardes, Gonçalo J. L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9401580/
https://www.ncbi.nlm.nih.gov/pubmed/35506504
http://dx.doi.org/10.1002/cmdc.202200174
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author Carvalho, Luís A. R.
Bernardes, Gonçalo J. L.
author_facet Carvalho, Luís A. R.
Bernardes, Gonçalo J. L.
author_sort Carvalho, Luís A. R.
collection PubMed
description Activity‐based protein profiling (ABPP) is an approach used at the interface of chemical biology and proteomics that uses small molecular probes to provide dynamic fingerprints of enzymatic activity in complex proteomes. Malaria is a disease caused by Plasmodium parasites with a significant death burden and for which new therapies are actively being sought. Here, we compile the main achievements from ABPP studies in malaria and highlight the probes used and the different downstream platforms for data analysis. ABPP has excelled at studying Plasmodium cysteine proteases and serine hydrolase families, the targeting of the proteasome and metabolic pathways, and in the deconvolution of targets and mechanisms of known antimalarials. Despite the major impact in the field, many antimalarials and enzymatic families in Plasmodium remain to be studied, which suggests ABPP will be an evergreen technique in the field.
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spelling pubmed-94015802022-08-26 The Impact of Activity‐Based Protein Profiling in Malaria Drug Discovery Carvalho, Luís A. R. Bernardes, Gonçalo J. L. ChemMedChem Reviews Activity‐based protein profiling (ABPP) is an approach used at the interface of chemical biology and proteomics that uses small molecular probes to provide dynamic fingerprints of enzymatic activity in complex proteomes. Malaria is a disease caused by Plasmodium parasites with a significant death burden and for which new therapies are actively being sought. Here, we compile the main achievements from ABPP studies in malaria and highlight the probes used and the different downstream platforms for data analysis. ABPP has excelled at studying Plasmodium cysteine proteases and serine hydrolase families, the targeting of the proteasome and metabolic pathways, and in the deconvolution of targets and mechanisms of known antimalarials. Despite the major impact in the field, many antimalarials and enzymatic families in Plasmodium remain to be studied, which suggests ABPP will be an evergreen technique in the field. John Wiley and Sons Inc. 2022-05-19 2022-07-19 /pmc/articles/PMC9401580/ /pubmed/35506504 http://dx.doi.org/10.1002/cmdc.202200174 Text en © 2022 The Authors. ChemMedChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Reviews
Carvalho, Luís A. R.
Bernardes, Gonçalo J. L.
The Impact of Activity‐Based Protein Profiling in Malaria Drug Discovery
title The Impact of Activity‐Based Protein Profiling in Malaria Drug Discovery
title_full The Impact of Activity‐Based Protein Profiling in Malaria Drug Discovery
title_fullStr The Impact of Activity‐Based Protein Profiling in Malaria Drug Discovery
title_full_unstemmed The Impact of Activity‐Based Protein Profiling in Malaria Drug Discovery
title_short The Impact of Activity‐Based Protein Profiling in Malaria Drug Discovery
title_sort impact of activity‐based protein profiling in malaria drug discovery
topic Reviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9401580/
https://www.ncbi.nlm.nih.gov/pubmed/35506504
http://dx.doi.org/10.1002/cmdc.202200174
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