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A Ferroptosis-Related Gene Signature for Predicting Survival and Immunotherapy Effect in Renal Cancer

BACKGROUND: Most recently, no efficient prognostic indictor is present for kidney cancer. Thus, we aimed to build and validate a new prognostic gene signature for renal cancer patients using the Cancer Genomic Atlas (TCGA). METHODS: A “time-dependent receiver operating characteristic (tROC)” curve w...

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Autores principales: Tong, Liang, Yin, Zhao-fa, Peng, Liang, Li, Yu-ting, Liu, Rong, Cai, Jia-rong, Kang, Le
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9402346/
https://www.ncbi.nlm.nih.gov/pubmed/36035304
http://dx.doi.org/10.1155/2022/3317624
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author Tong, Liang
Yin, Zhao-fa
Peng, Liang
Li, Yu-ting
Liu, Rong
Cai, Jia-rong
Kang, Le
author_facet Tong, Liang
Yin, Zhao-fa
Peng, Liang
Li, Yu-ting
Liu, Rong
Cai, Jia-rong
Kang, Le
author_sort Tong, Liang
collection PubMed
description BACKGROUND: Most recently, no efficient prognostic indictor is present for kidney cancer. Thus, we aimed to build and validate a new prognostic gene signature for renal cancer patients using the Cancer Genomic Atlas (TCGA). METHODS: A “time-dependent receiver operating characteristic (tROC)” curve was generated, and a log-rank test was performed to assess the performance of the biomarker in training and validation. A “ferroptosis-related gene signature” was developed. In different training and validations sets, tROC and log-rank test were used to validate the biomarker's performance. RESULTS: In the training set with a P value less than 0.01 and the validation set, the “gene signature” was significantly correlated with survival. Eventually, it was found that the ferroptosis-related gene signature was directly correlated with immune score and the score of tumor mutation, suggesting its role in predicting response to immunotherapy. CONCLUSION: We developed and validated a “ferroptosis-related gene signature” that can be sued for patients with kidney cancer. It can also assist in facilitating the plan for treatment and risk stratification.
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spelling pubmed-94023462022-08-25 A Ferroptosis-Related Gene Signature for Predicting Survival and Immunotherapy Effect in Renal Cancer Tong, Liang Yin, Zhao-fa Peng, Liang Li, Yu-ting Liu, Rong Cai, Jia-rong Kang, Le Comput Math Methods Med Research Article BACKGROUND: Most recently, no efficient prognostic indictor is present for kidney cancer. Thus, we aimed to build and validate a new prognostic gene signature for renal cancer patients using the Cancer Genomic Atlas (TCGA). METHODS: A “time-dependent receiver operating characteristic (tROC)” curve was generated, and a log-rank test was performed to assess the performance of the biomarker in training and validation. A “ferroptosis-related gene signature” was developed. In different training and validations sets, tROC and log-rank test were used to validate the biomarker's performance. RESULTS: In the training set with a P value less than 0.01 and the validation set, the “gene signature” was significantly correlated with survival. Eventually, it was found that the ferroptosis-related gene signature was directly correlated with immune score and the score of tumor mutation, suggesting its role in predicting response to immunotherapy. CONCLUSION: We developed and validated a “ferroptosis-related gene signature” that can be sued for patients with kidney cancer. It can also assist in facilitating the plan for treatment and risk stratification. Hindawi 2022-08-17 /pmc/articles/PMC9402346/ /pubmed/36035304 http://dx.doi.org/10.1155/2022/3317624 Text en Copyright © 2022 Liang Tong et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Tong, Liang
Yin, Zhao-fa
Peng, Liang
Li, Yu-ting
Liu, Rong
Cai, Jia-rong
Kang, Le
A Ferroptosis-Related Gene Signature for Predicting Survival and Immunotherapy Effect in Renal Cancer
title A Ferroptosis-Related Gene Signature for Predicting Survival and Immunotherapy Effect in Renal Cancer
title_full A Ferroptosis-Related Gene Signature for Predicting Survival and Immunotherapy Effect in Renal Cancer
title_fullStr A Ferroptosis-Related Gene Signature for Predicting Survival and Immunotherapy Effect in Renal Cancer
title_full_unstemmed A Ferroptosis-Related Gene Signature for Predicting Survival and Immunotherapy Effect in Renal Cancer
title_short A Ferroptosis-Related Gene Signature for Predicting Survival and Immunotherapy Effect in Renal Cancer
title_sort ferroptosis-related gene signature for predicting survival and immunotherapy effect in renal cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9402346/
https://www.ncbi.nlm.nih.gov/pubmed/36035304
http://dx.doi.org/10.1155/2022/3317624
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