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Evaluating the performance of Bayesian and frequentist approaches for longitudinal modeling: application to Alzheimer’s disease

Linear mixed effects (LME) modelling under both frequentist and Bayesian frameworks can be used to study longitudinal trajectories. We studied the performance of both frameworks on different dataset configurations using hippocampal volumes from longitudinal MRI data across groups—healthy controls (H...

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Autores principales: Pérez-Millan, Agnès, Contador, José, Tudela, Raúl, Niñerola-Baizán, Aida, Setoain, Xavier, Lladó, Albert, Sánchez-Valle, Raquel, Sala-Llonch, Roser
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9402558/
https://www.ncbi.nlm.nih.gov/pubmed/36002550
http://dx.doi.org/10.1038/s41598-022-18129-4
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author Pérez-Millan, Agnès
Contador, José
Tudela, Raúl
Niñerola-Baizán, Aida
Setoain, Xavier
Lladó, Albert
Sánchez-Valle, Raquel
Sala-Llonch, Roser
author_facet Pérez-Millan, Agnès
Contador, José
Tudela, Raúl
Niñerola-Baizán, Aida
Setoain, Xavier
Lladó, Albert
Sánchez-Valle, Raquel
Sala-Llonch, Roser
author_sort Pérez-Millan, Agnès
collection PubMed
description Linear mixed effects (LME) modelling under both frequentist and Bayesian frameworks can be used to study longitudinal trajectories. We studied the performance of both frameworks on different dataset configurations using hippocampal volumes from longitudinal MRI data across groups—healthy controls (HC), mild cognitive impairment (MCI) and Alzheimer’s disease (AD) patients, including subjects that converted from MCI to AD. We started from a big database of 1250 subjects from the Alzheimer’s disease neuroimaging initiative (ADNI), and we created different reduced datasets simulating real-life situations using a random-removal permutation-based approach. The number of subjects needed to differentiate groups and to detect conversion to AD was 147 and 115 respectively. The Bayesian approach allowed estimating the LME model even with very sparse databases, with high number of missing points, which was not possible with the frequentist approach. Our results indicate that the frequentist approach is computationally simpler, but it fails in modelling data with high number of missing values.
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spelling pubmed-94025582022-08-26 Evaluating the performance of Bayesian and frequentist approaches for longitudinal modeling: application to Alzheimer’s disease Pérez-Millan, Agnès Contador, José Tudela, Raúl Niñerola-Baizán, Aida Setoain, Xavier Lladó, Albert Sánchez-Valle, Raquel Sala-Llonch, Roser Sci Rep Article Linear mixed effects (LME) modelling under both frequentist and Bayesian frameworks can be used to study longitudinal trajectories. We studied the performance of both frameworks on different dataset configurations using hippocampal volumes from longitudinal MRI data across groups—healthy controls (HC), mild cognitive impairment (MCI) and Alzheimer’s disease (AD) patients, including subjects that converted from MCI to AD. We started from a big database of 1250 subjects from the Alzheimer’s disease neuroimaging initiative (ADNI), and we created different reduced datasets simulating real-life situations using a random-removal permutation-based approach. The number of subjects needed to differentiate groups and to detect conversion to AD was 147 and 115 respectively. The Bayesian approach allowed estimating the LME model even with very sparse databases, with high number of missing points, which was not possible with the frequentist approach. Our results indicate that the frequentist approach is computationally simpler, but it fails in modelling data with high number of missing values. Nature Publishing Group UK 2022-08-24 /pmc/articles/PMC9402558/ /pubmed/36002550 http://dx.doi.org/10.1038/s41598-022-18129-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Pérez-Millan, Agnès
Contador, José
Tudela, Raúl
Niñerola-Baizán, Aida
Setoain, Xavier
Lladó, Albert
Sánchez-Valle, Raquel
Sala-Llonch, Roser
Evaluating the performance of Bayesian and frequentist approaches for longitudinal modeling: application to Alzheimer’s disease
title Evaluating the performance of Bayesian and frequentist approaches for longitudinal modeling: application to Alzheimer’s disease
title_full Evaluating the performance of Bayesian and frequentist approaches for longitudinal modeling: application to Alzheimer’s disease
title_fullStr Evaluating the performance of Bayesian and frequentist approaches for longitudinal modeling: application to Alzheimer’s disease
title_full_unstemmed Evaluating the performance of Bayesian and frequentist approaches for longitudinal modeling: application to Alzheimer’s disease
title_short Evaluating the performance of Bayesian and frequentist approaches for longitudinal modeling: application to Alzheimer’s disease
title_sort evaluating the performance of bayesian and frequentist approaches for longitudinal modeling: application to alzheimer’s disease
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9402558/
https://www.ncbi.nlm.nih.gov/pubmed/36002550
http://dx.doi.org/10.1038/s41598-022-18129-4
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