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A scale-dependent measure of system dimensionality

A fundamental problem in science is uncovering the effective number of degrees of freedom in a complex system: its dimensionality. A system’s dimensionality depends on its spatiotemporal scale. Here, we introduce a scale-dependent generalization of a classic enumeration of latent variables, the part...

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Autores principales: Recanatesi, Stefano, Bradde, Serena, Balasubramanian, Vijay, Steinmetz, Nicholas A., Shea-Brown, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9403367/
https://www.ncbi.nlm.nih.gov/pubmed/36033586
http://dx.doi.org/10.1016/j.patter.2022.100555
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author Recanatesi, Stefano
Bradde, Serena
Balasubramanian, Vijay
Steinmetz, Nicholas A.
Shea-Brown, Eric
author_facet Recanatesi, Stefano
Bradde, Serena
Balasubramanian, Vijay
Steinmetz, Nicholas A.
Shea-Brown, Eric
author_sort Recanatesi, Stefano
collection PubMed
description A fundamental problem in science is uncovering the effective number of degrees of freedom in a complex system: its dimensionality. A system’s dimensionality depends on its spatiotemporal scale. Here, we introduce a scale-dependent generalization of a classic enumeration of latent variables, the participation ratio. We demonstrate how the scale-dependent participation ratio identifies the appropriate dimension at local, intermediate, and global scales in several systems such as the Lorenz attractor, hidden Markov models, and switching linear dynamical systems. We show analytically how, at different limiting scales, the scale-dependent participation ratio relates to well-established measures of dimensionality. This measure applied in neural population recordings across multiple brain areas and brain states shows fundamental trends in the dimensionality of neural activity—for example, in behaviorally engaged versus spontaneous states. Our novel method unifies widely used measures of dimensionality and applies broadly to multivariate data across several fields of science.
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spelling pubmed-94033672022-08-26 A scale-dependent measure of system dimensionality Recanatesi, Stefano Bradde, Serena Balasubramanian, Vijay Steinmetz, Nicholas A. Shea-Brown, Eric Patterns (N Y) Article A fundamental problem in science is uncovering the effective number of degrees of freedom in a complex system: its dimensionality. A system’s dimensionality depends on its spatiotemporal scale. Here, we introduce a scale-dependent generalization of a classic enumeration of latent variables, the participation ratio. We demonstrate how the scale-dependent participation ratio identifies the appropriate dimension at local, intermediate, and global scales in several systems such as the Lorenz attractor, hidden Markov models, and switching linear dynamical systems. We show analytically how, at different limiting scales, the scale-dependent participation ratio relates to well-established measures of dimensionality. This measure applied in neural population recordings across multiple brain areas and brain states shows fundamental trends in the dimensionality of neural activity—for example, in behaviorally engaged versus spontaneous states. Our novel method unifies widely used measures of dimensionality and applies broadly to multivariate data across several fields of science. Elsevier 2022-08-06 /pmc/articles/PMC9403367/ /pubmed/36033586 http://dx.doi.org/10.1016/j.patter.2022.100555 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Recanatesi, Stefano
Bradde, Serena
Balasubramanian, Vijay
Steinmetz, Nicholas A.
Shea-Brown, Eric
A scale-dependent measure of system dimensionality
title A scale-dependent measure of system dimensionality
title_full A scale-dependent measure of system dimensionality
title_fullStr A scale-dependent measure of system dimensionality
title_full_unstemmed A scale-dependent measure of system dimensionality
title_short A scale-dependent measure of system dimensionality
title_sort scale-dependent measure of system dimensionality
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9403367/
https://www.ncbi.nlm.nih.gov/pubmed/36033586
http://dx.doi.org/10.1016/j.patter.2022.100555
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