Cargando…

Distinct GmASMTs are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean

N-Acetylserotonin O-methyltransferase (ASMT) is the final enzyme involved in melatonin biosynthesis. Identifying the expression of ASMT will reveal the regulatory role in the development and stress conditions in soybean. To identify and characterize ASMT in soybean (GmASMT), we employed genome-wide...

Descripción completa

Detalles Bibliográficos
Autores principales: Kumar, Gyanendra, Arya, Monisha, Padma, Radhika, Puthusseri, Bijesh, Giridhar, Parvatam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9403468/
https://www.ncbi.nlm.nih.gov/pubmed/36035712
http://dx.doi.org/10.3389/fpls.2022.948901
_version_ 1784773383719747584
author Kumar, Gyanendra
Arya, Monisha
Padma, Radhika
Puthusseri, Bijesh
Giridhar, Parvatam
author_facet Kumar, Gyanendra
Arya, Monisha
Padma, Radhika
Puthusseri, Bijesh
Giridhar, Parvatam
author_sort Kumar, Gyanendra
collection PubMed
description N-Acetylserotonin O-methyltransferase (ASMT) is the final enzyme involved in melatonin biosynthesis. Identifying the expression of ASMT will reveal the regulatory role in the development and stress conditions in soybean. To identify and characterize ASMT in soybean (GmASMT), we employed genome-wide analysis, gene structure, cis-acting elements, gene expression, co-expression network analysis, and enzyme assay. We found seven pairs of segmental and tandem duplication pairs among the 44 identified GmASMTs by genome-wide analysis. Notably, co-expression network analysis reported that distinct GmASMTs are involved in various stress response. For example, GmASMT3, GmASMT44, GmASMT17, and GmASMT7 are involved in embryo development, heat, drought, aphid, and soybean cyst nematode infections, respectively. These distinct networks of GmASMTs were associated with transcription factors (NAC, MYB, WRKY, and ERF), stress signalling, isoflavone and secondary metabolites, calcium, and calmodulin proteins involved in stress regulation. Further, GmASMTs demonstrated auxin-like activities by regulating the genes involved in auxin transporter (WAT1 and NRT1/PTR) and auxin-responsive protein during developmental and biotic stress. The current study identified the key regulatory role of GmASMTs during development and stress. Hence GmASMT could be the primary target in genetic engineering for crop improvement under changing environmental conditions.
format Online
Article
Text
id pubmed-9403468
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-94034682022-08-26 Distinct GmASMTs are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean Kumar, Gyanendra Arya, Monisha Padma, Radhika Puthusseri, Bijesh Giridhar, Parvatam Front Plant Sci Plant Science N-Acetylserotonin O-methyltransferase (ASMT) is the final enzyme involved in melatonin biosynthesis. Identifying the expression of ASMT will reveal the regulatory role in the development and stress conditions in soybean. To identify and characterize ASMT in soybean (GmASMT), we employed genome-wide analysis, gene structure, cis-acting elements, gene expression, co-expression network analysis, and enzyme assay. We found seven pairs of segmental and tandem duplication pairs among the 44 identified GmASMTs by genome-wide analysis. Notably, co-expression network analysis reported that distinct GmASMTs are involved in various stress response. For example, GmASMT3, GmASMT44, GmASMT17, and GmASMT7 are involved in embryo development, heat, drought, aphid, and soybean cyst nematode infections, respectively. These distinct networks of GmASMTs were associated with transcription factors (NAC, MYB, WRKY, and ERF), stress signalling, isoflavone and secondary metabolites, calcium, and calmodulin proteins involved in stress regulation. Further, GmASMTs demonstrated auxin-like activities by regulating the genes involved in auxin transporter (WAT1 and NRT1/PTR) and auxin-responsive protein during developmental and biotic stress. The current study identified the key regulatory role of GmASMTs during development and stress. Hence GmASMT could be the primary target in genetic engineering for crop improvement under changing environmental conditions. Frontiers Media S.A. 2022-08-11 /pmc/articles/PMC9403468/ /pubmed/36035712 http://dx.doi.org/10.3389/fpls.2022.948901 Text en Copyright © 2022 Kumar, Arya, Padma, Puthusseri and Giridhar. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Kumar, Gyanendra
Arya, Monisha
Padma, Radhika
Puthusseri, Bijesh
Giridhar, Parvatam
Distinct GmASMTs are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean
title Distinct GmASMTs are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean
title_full Distinct GmASMTs are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean
title_fullStr Distinct GmASMTs are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean
title_full_unstemmed Distinct GmASMTs are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean
title_short Distinct GmASMTs are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean
title_sort distinct gmasmts are involved in regulating transcription factors and signalling cross-talk across embryo development, biotic, and abiotic stress in soybean
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9403468/
https://www.ncbi.nlm.nih.gov/pubmed/36035712
http://dx.doi.org/10.3389/fpls.2022.948901
work_keys_str_mv AT kumargyanendra distinctgmasmtsareinvolvedinregulatingtranscriptionfactorsandsignallingcrosstalkacrossembryodevelopmentbioticandabioticstressinsoybean
AT aryamonisha distinctgmasmtsareinvolvedinregulatingtranscriptionfactorsandsignallingcrosstalkacrossembryodevelopmentbioticandabioticstressinsoybean
AT padmaradhika distinctgmasmtsareinvolvedinregulatingtranscriptionfactorsandsignallingcrosstalkacrossembryodevelopmentbioticandabioticstressinsoybean
AT puthusseribijesh distinctgmasmtsareinvolvedinregulatingtranscriptionfactorsandsignallingcrosstalkacrossembryodevelopmentbioticandabioticstressinsoybean
AT giridharparvatam distinctgmasmtsareinvolvedinregulatingtranscriptionfactorsandsignallingcrosstalkacrossembryodevelopmentbioticandabioticstressinsoybean