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Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training

The detection of brain metastases (BM) in their early stages could have a positive impact on the outcome of cancer patients. The authors previously developed a framework for detecting small BM (with diameters of <15 mm) in T1-weighted contrast-enhanced 3D magnetic resonance images (T1c). This stu...

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Autores principales: Dikici, Engin, Nguyen, Xuan V., Bigelow, Matthew, Ryu, John L., Prevedello, Luciano M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9407228/
https://www.ncbi.nlm.nih.gov/pubmed/36010373
http://dx.doi.org/10.3390/diagnostics12082023
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author Dikici, Engin
Nguyen, Xuan V.
Bigelow, Matthew
Ryu, John L.
Prevedello, Luciano M.
author_facet Dikici, Engin
Nguyen, Xuan V.
Bigelow, Matthew
Ryu, John L.
Prevedello, Luciano M.
author_sort Dikici, Engin
collection PubMed
description The detection of brain metastases (BM) in their early stages could have a positive impact on the outcome of cancer patients. The authors previously developed a framework for detecting small BM (with diameters of <15 mm) in T1-weighted contrast-enhanced 3D magnetic resonance images (T1c). This study aimed to advance the framework with a noisy-student-based self-training strategy to use a large corpus of unlabeled T1c data. Accordingly, a sensitivity-based noisy-student learning approach was formulated to provide high BM detection sensitivity with a reduced count of false positives. This paper (1) proposes student/teacher convolutional neural network architectures, (2) presents data and model noising mechanisms, and (3) introduces a novel pseudo-labeling strategy factoring in the sensitivity constraint. The evaluation was performed using 217 labeled and 1247 unlabeled exams via two-fold cross-validation. The framework utilizing only the labeled exams produced 9.23 false positives for 90% BM detection sensitivity, whereas the one using the introduced learning strategy led to ~9% reduction in false detections (i.e., 8.44). Significant reductions in false positives (>10%) were also observed in reduced labeled data scenarios (using 50% and 75% of labeled data). The results suggest that the introduced strategy could be utilized in existing medical detection applications with access to unlabeled datasets to elevate their performances.
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spelling pubmed-94072282022-08-26 Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training Dikici, Engin Nguyen, Xuan V. Bigelow, Matthew Ryu, John L. Prevedello, Luciano M. Diagnostics (Basel) Article The detection of brain metastases (BM) in their early stages could have a positive impact on the outcome of cancer patients. The authors previously developed a framework for detecting small BM (with diameters of <15 mm) in T1-weighted contrast-enhanced 3D magnetic resonance images (T1c). This study aimed to advance the framework with a noisy-student-based self-training strategy to use a large corpus of unlabeled T1c data. Accordingly, a sensitivity-based noisy-student learning approach was formulated to provide high BM detection sensitivity with a reduced count of false positives. This paper (1) proposes student/teacher convolutional neural network architectures, (2) presents data and model noising mechanisms, and (3) introduces a novel pseudo-labeling strategy factoring in the sensitivity constraint. The evaluation was performed using 217 labeled and 1247 unlabeled exams via two-fold cross-validation. The framework utilizing only the labeled exams produced 9.23 false positives for 90% BM detection sensitivity, whereas the one using the introduced learning strategy led to ~9% reduction in false detections (i.e., 8.44). Significant reductions in false positives (>10%) were also observed in reduced labeled data scenarios (using 50% and 75% of labeled data). The results suggest that the introduced strategy could be utilized in existing medical detection applications with access to unlabeled datasets to elevate their performances. MDPI 2022-08-21 /pmc/articles/PMC9407228/ /pubmed/36010373 http://dx.doi.org/10.3390/diagnostics12082023 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dikici, Engin
Nguyen, Xuan V.
Bigelow, Matthew
Ryu, John L.
Prevedello, Luciano M.
Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training
title Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training
title_full Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training
title_fullStr Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training
title_full_unstemmed Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training
title_short Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training
title_sort advancing brain metastases detection in t1-weighted contrast-enhanced 3d mri using noisy student-based training
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9407228/
https://www.ncbi.nlm.nih.gov/pubmed/36010373
http://dx.doi.org/10.3390/diagnostics12082023
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