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Identification of the Key Pathways and Genes Involved in the Wax Biosynthesis of the Chinese White Wax Scale Insect (Ericerus pela Chavannes) by Integrated Weighted Gene Coexpression Network Analysis

The white wax secreted by the male insects of the Chinese white wax scale (CWWS) is a natural high-molecular-weight compound with important economic value. However, its regulatory mechanism of wax biosynthesis is still unclear. In this study, a weighted gene coexpression network analysis (WGCNA) was...

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Autores principales: Ding, Wei-Feng, Ling, Xiao-Fei, Lu, Qin, Wang, Wei-Wei, Zhang, Xin, Feng, Ying, Chen, Xiao-Ming, Chen, Hang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9407328/
https://www.ncbi.nlm.nih.gov/pubmed/36011275
http://dx.doi.org/10.3390/genes13081364
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author Ding, Wei-Feng
Ling, Xiao-Fei
Lu, Qin
Wang, Wei-Wei
Zhang, Xin
Feng, Ying
Chen, Xiao-Ming
Chen, Hang
author_facet Ding, Wei-Feng
Ling, Xiao-Fei
Lu, Qin
Wang, Wei-Wei
Zhang, Xin
Feng, Ying
Chen, Xiao-Ming
Chen, Hang
author_sort Ding, Wei-Feng
collection PubMed
description The white wax secreted by the male insects of the Chinese white wax scale (CWWS) is a natural high-molecular-weight compound with important economic value. However, its regulatory mechanism of wax biosynthesis is still unclear. In this study, a weighted gene coexpression network analysis (WGCNA) was used to analyze transcriptome data of first- and second-instar females, early and late female adults, and first- and second-instar males. A total of 19 partitioned modules with different topological overlaps were obtained, and three modules were identified as highly significant for wax secretion (p < 0.05). A total of 30 hub genes were obtained through screening, among which elongation of very-long-chain fatty acids protein (ELOVL) and fatty acyl-CoA reductase (FAR) are important catalytic enzymes of fatty acid metabolism. Furthermore, their metabolic catalytic products are involved in the synthesis of wax biosynthesis. The results demonstrate that WGCNA can be used for insect transcriptome analysis and effectively screen out the key genes related to wax biosynthesis.
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spelling pubmed-94073282022-08-26 Identification of the Key Pathways and Genes Involved in the Wax Biosynthesis of the Chinese White Wax Scale Insect (Ericerus pela Chavannes) by Integrated Weighted Gene Coexpression Network Analysis Ding, Wei-Feng Ling, Xiao-Fei Lu, Qin Wang, Wei-Wei Zhang, Xin Feng, Ying Chen, Xiao-Ming Chen, Hang Genes (Basel) Article The white wax secreted by the male insects of the Chinese white wax scale (CWWS) is a natural high-molecular-weight compound with important economic value. However, its regulatory mechanism of wax biosynthesis is still unclear. In this study, a weighted gene coexpression network analysis (WGCNA) was used to analyze transcriptome data of first- and second-instar females, early and late female adults, and first- and second-instar males. A total of 19 partitioned modules with different topological overlaps were obtained, and three modules were identified as highly significant for wax secretion (p < 0.05). A total of 30 hub genes were obtained through screening, among which elongation of very-long-chain fatty acids protein (ELOVL) and fatty acyl-CoA reductase (FAR) are important catalytic enzymes of fatty acid metabolism. Furthermore, their metabolic catalytic products are involved in the synthesis of wax biosynthesis. The results demonstrate that WGCNA can be used for insect transcriptome analysis and effectively screen out the key genes related to wax biosynthesis. MDPI 2022-07-29 /pmc/articles/PMC9407328/ /pubmed/36011275 http://dx.doi.org/10.3390/genes13081364 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ding, Wei-Feng
Ling, Xiao-Fei
Lu, Qin
Wang, Wei-Wei
Zhang, Xin
Feng, Ying
Chen, Xiao-Ming
Chen, Hang
Identification of the Key Pathways and Genes Involved in the Wax Biosynthesis of the Chinese White Wax Scale Insect (Ericerus pela Chavannes) by Integrated Weighted Gene Coexpression Network Analysis
title Identification of the Key Pathways and Genes Involved in the Wax Biosynthesis of the Chinese White Wax Scale Insect (Ericerus pela Chavannes) by Integrated Weighted Gene Coexpression Network Analysis
title_full Identification of the Key Pathways and Genes Involved in the Wax Biosynthesis of the Chinese White Wax Scale Insect (Ericerus pela Chavannes) by Integrated Weighted Gene Coexpression Network Analysis
title_fullStr Identification of the Key Pathways and Genes Involved in the Wax Biosynthesis of the Chinese White Wax Scale Insect (Ericerus pela Chavannes) by Integrated Weighted Gene Coexpression Network Analysis
title_full_unstemmed Identification of the Key Pathways and Genes Involved in the Wax Biosynthesis of the Chinese White Wax Scale Insect (Ericerus pela Chavannes) by Integrated Weighted Gene Coexpression Network Analysis
title_short Identification of the Key Pathways and Genes Involved in the Wax Biosynthesis of the Chinese White Wax Scale Insect (Ericerus pela Chavannes) by Integrated Weighted Gene Coexpression Network Analysis
title_sort identification of the key pathways and genes involved in the wax biosynthesis of the chinese white wax scale insect (ericerus pela chavannes) by integrated weighted gene coexpression network analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9407328/
https://www.ncbi.nlm.nih.gov/pubmed/36011275
http://dx.doi.org/10.3390/genes13081364
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