Cargando…

A Fast and Efficient Ensemble Transfer Entropy and Applications in Neural Signals

The ensemble transfer entropy ([Formula: see text]) refers to the transfer entropy estimated from an ensemble of realizations. Due to its time-resolved analysis, it is adapted to analyze the dynamic interaction between brain regions. However, in the traditional [Formula: see text] , multiple sets of...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhu, Junyao, Chen, Mingming, Lu, Junfeng, Zhao, Kun, Cui, Enze, Zhang, Zhiheng, Wan, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9407540/
https://www.ncbi.nlm.nih.gov/pubmed/36010782
http://dx.doi.org/10.3390/e24081118
_version_ 1784774389104902144
author Zhu, Junyao
Chen, Mingming
Lu, Junfeng
Zhao, Kun
Cui, Enze
Zhang, Zhiheng
Wan, Hong
author_facet Zhu, Junyao
Chen, Mingming
Lu, Junfeng
Zhao, Kun
Cui, Enze
Zhang, Zhiheng
Wan, Hong
author_sort Zhu, Junyao
collection PubMed
description The ensemble transfer entropy ([Formula: see text]) refers to the transfer entropy estimated from an ensemble of realizations. Due to its time-resolved analysis, it is adapted to analyze the dynamic interaction between brain regions. However, in the traditional [Formula: see text] , multiple sets of surrogate data should be used to construct the null hypothesis distribution, which dramatically increases the computational complexity. To reduce the computational cost, a fast, efficient [Formula: see text] with a simple statistical test method is proposed here, in which just one set of surrogate data is involved. To validate the improved efficiency, the simulated neural signals are used to compare the characteristics of the novel [Formula: see text] with those of the traditional [Formula: see text]. The results show that the time consumption is reduced by two or three magnitudes in the novel [Formula: see text]. Importantly, the proposed [Formula: see text] could accurately track the dynamic interaction process and detect the strength and the direction of interaction robustly even in the presence of moderate noises. The novel [Formula: see text] reaches its steady state with the increased samples, which is slower than the traditional method. Furthermore, the effectiveness of the novel [Formula: see text] was verified in the actual neural signals. Accordingly, the [Formula: see text] proposed in this work may provide a suitable way to investigate the dynamic interactions between brain regions.
format Online
Article
Text
id pubmed-9407540
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-94075402022-08-26 A Fast and Efficient Ensemble Transfer Entropy and Applications in Neural Signals Zhu, Junyao Chen, Mingming Lu, Junfeng Zhao, Kun Cui, Enze Zhang, Zhiheng Wan, Hong Entropy (Basel) Article The ensemble transfer entropy ([Formula: see text]) refers to the transfer entropy estimated from an ensemble of realizations. Due to its time-resolved analysis, it is adapted to analyze the dynamic interaction between brain regions. However, in the traditional [Formula: see text] , multiple sets of surrogate data should be used to construct the null hypothesis distribution, which dramatically increases the computational complexity. To reduce the computational cost, a fast, efficient [Formula: see text] with a simple statistical test method is proposed here, in which just one set of surrogate data is involved. To validate the improved efficiency, the simulated neural signals are used to compare the characteristics of the novel [Formula: see text] with those of the traditional [Formula: see text]. The results show that the time consumption is reduced by two or three magnitudes in the novel [Formula: see text]. Importantly, the proposed [Formula: see text] could accurately track the dynamic interaction process and detect the strength and the direction of interaction robustly even in the presence of moderate noises. The novel [Formula: see text] reaches its steady state with the increased samples, which is slower than the traditional method. Furthermore, the effectiveness of the novel [Formula: see text] was verified in the actual neural signals. Accordingly, the [Formula: see text] proposed in this work may provide a suitable way to investigate the dynamic interactions between brain regions. MDPI 2022-08-13 /pmc/articles/PMC9407540/ /pubmed/36010782 http://dx.doi.org/10.3390/e24081118 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhu, Junyao
Chen, Mingming
Lu, Junfeng
Zhao, Kun
Cui, Enze
Zhang, Zhiheng
Wan, Hong
A Fast and Efficient Ensemble Transfer Entropy and Applications in Neural Signals
title A Fast and Efficient Ensemble Transfer Entropy and Applications in Neural Signals
title_full A Fast and Efficient Ensemble Transfer Entropy and Applications in Neural Signals
title_fullStr A Fast and Efficient Ensemble Transfer Entropy and Applications in Neural Signals
title_full_unstemmed A Fast and Efficient Ensemble Transfer Entropy and Applications in Neural Signals
title_short A Fast and Efficient Ensemble Transfer Entropy and Applications in Neural Signals
title_sort fast and efficient ensemble transfer entropy and applications in neural signals
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9407540/
https://www.ncbi.nlm.nih.gov/pubmed/36010782
http://dx.doi.org/10.3390/e24081118
work_keys_str_mv AT zhujunyao afastandefficientensembletransferentropyandapplicationsinneuralsignals
AT chenmingming afastandefficientensembletransferentropyandapplicationsinneuralsignals
AT lujunfeng afastandefficientensembletransferentropyandapplicationsinneuralsignals
AT zhaokun afastandefficientensembletransferentropyandapplicationsinneuralsignals
AT cuienze afastandefficientensembletransferentropyandapplicationsinneuralsignals
AT zhangzhiheng afastandefficientensembletransferentropyandapplicationsinneuralsignals
AT wanhong afastandefficientensembletransferentropyandapplicationsinneuralsignals
AT zhujunyao fastandefficientensembletransferentropyandapplicationsinneuralsignals
AT chenmingming fastandefficientensembletransferentropyandapplicationsinneuralsignals
AT lujunfeng fastandefficientensembletransferentropyandapplicationsinneuralsignals
AT zhaokun fastandefficientensembletransferentropyandapplicationsinneuralsignals
AT cuienze fastandefficientensembletransferentropyandapplicationsinneuralsignals
AT zhangzhiheng fastandefficientensembletransferentropyandapplicationsinneuralsignals
AT wanhong fastandefficientensembletransferentropyandapplicationsinneuralsignals