Cargando…

An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins

X-ray radiolytic labeling uses broadband X-rays for in situ hydroxyl radical labeling to map protein interactions and conformation. High flux density beams are essential to overcome radical scavengers. However, conventional sample delivery environments, such as capillary flow, limit the use of a ful...

Descripción completa

Detalles Bibliográficos
Autores principales: Rosi, Matthew, Russell, Brandon, Kristensen, Line G., Farquhar, Erik R., Jain, Rohit, Abel, Donald, Sullivan, Michael, Costello, Shawn M., Dominguez-Martin, Maria Agustina, Chen, Yan, Marqusee, Susan, Petzold, Christopher J., Kerfeld, Cheryl A., DePonte, Daniel P., Farahmand, Farid, Gupta, Sayan, Ralston, Corie Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9411504/
https://www.ncbi.nlm.nih.gov/pubmed/36008591
http://dx.doi.org/10.1038/s42003-022-03775-1
_version_ 1784775283259211776
author Rosi, Matthew
Russell, Brandon
Kristensen, Line G.
Farquhar, Erik R.
Jain, Rohit
Abel, Donald
Sullivan, Michael
Costello, Shawn M.
Dominguez-Martin, Maria Agustina
Chen, Yan
Marqusee, Susan
Petzold, Christopher J.
Kerfeld, Cheryl A.
DePonte, Daniel P.
Farahmand, Farid
Gupta, Sayan
Ralston, Corie Y.
author_facet Rosi, Matthew
Russell, Brandon
Kristensen, Line G.
Farquhar, Erik R.
Jain, Rohit
Abel, Donald
Sullivan, Michael
Costello, Shawn M.
Dominguez-Martin, Maria Agustina
Chen, Yan
Marqusee, Susan
Petzold, Christopher J.
Kerfeld, Cheryl A.
DePonte, Daniel P.
Farahmand, Farid
Gupta, Sayan
Ralston, Corie Y.
author_sort Rosi, Matthew
collection PubMed
description X-ray radiolytic labeling uses broadband X-rays for in situ hydroxyl radical labeling to map protein interactions and conformation. High flux density beams are essential to overcome radical scavengers. However, conventional sample delivery environments, such as capillary flow, limit the use of a fully unattenuated focused broadband beam. An alternative is to use a liquid jet, and we have previously demonstrated that use of this form of sample delivery can increase labeling by tenfold at an unfocused X-ray source. Here we report the first use of a liquid jet for automated inline quantitative fluorescence dosage characterization and sample exposure at a high flux density microfocused synchrotron beamline. Our approach enables exposure times in single-digit microseconds while retaining a high level of side-chain labeling. This development significantly boosts the method’s overall effectiveness and efficiency, generates high-quality data, and opens up the arena for high throughput and ultrafast time-resolved in situ hydroxyl radical labeling.
format Online
Article
Text
id pubmed-9411504
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-94115042022-08-27 An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins Rosi, Matthew Russell, Brandon Kristensen, Line G. Farquhar, Erik R. Jain, Rohit Abel, Donald Sullivan, Michael Costello, Shawn M. Dominguez-Martin, Maria Agustina Chen, Yan Marqusee, Susan Petzold, Christopher J. Kerfeld, Cheryl A. DePonte, Daniel P. Farahmand, Farid Gupta, Sayan Ralston, Corie Y. Commun Biol Article X-ray radiolytic labeling uses broadband X-rays for in situ hydroxyl radical labeling to map protein interactions and conformation. High flux density beams are essential to overcome radical scavengers. However, conventional sample delivery environments, such as capillary flow, limit the use of a fully unattenuated focused broadband beam. An alternative is to use a liquid jet, and we have previously demonstrated that use of this form of sample delivery can increase labeling by tenfold at an unfocused X-ray source. Here we report the first use of a liquid jet for automated inline quantitative fluorescence dosage characterization and sample exposure at a high flux density microfocused synchrotron beamline. Our approach enables exposure times in single-digit microseconds while retaining a high level of side-chain labeling. This development significantly boosts the method’s overall effectiveness and efficiency, generates high-quality data, and opens up the arena for high throughput and ultrafast time-resolved in situ hydroxyl radical labeling. Nature Publishing Group UK 2022-08-25 /pmc/articles/PMC9411504/ /pubmed/36008591 http://dx.doi.org/10.1038/s42003-022-03775-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Rosi, Matthew
Russell, Brandon
Kristensen, Line G.
Farquhar, Erik R.
Jain, Rohit
Abel, Donald
Sullivan, Michael
Costello, Shawn M.
Dominguez-Martin, Maria Agustina
Chen, Yan
Marqusee, Susan
Petzold, Christopher J.
Kerfeld, Cheryl A.
DePonte, Daniel P.
Farahmand, Farid
Gupta, Sayan
Ralston, Corie Y.
An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins
title An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins
title_full An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins
title_fullStr An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins
title_full_unstemmed An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins
title_short An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins
title_sort automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9411504/
https://www.ncbi.nlm.nih.gov/pubmed/36008591
http://dx.doi.org/10.1038/s42003-022-03775-1
work_keys_str_mv AT rosimatthew anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT russellbrandon anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT kristensenlineg anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT farquharerikr anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT jainrohit anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT abeldonald anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT sullivanmichael anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT costelloshawnm anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT dominguezmartinmariaagustina anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT chenyan anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT marquseesusan anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT petzoldchristopherj anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT kerfeldcheryla anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT depontedanielp anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT farahmandfarid anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT guptasayan anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT ralstoncoriey anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT rosimatthew automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT russellbrandon automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT kristensenlineg automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT farquharerikr automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT jainrohit automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT abeldonald automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT sullivanmichael automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT costelloshawnm automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT dominguezmartinmariaagustina automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT chenyan automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT marquseesusan automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT petzoldchristopherj automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT kerfeldcheryla automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT depontedanielp automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT farahmandfarid automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT guptasayan automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins
AT ralstoncoriey automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins