Cargando…
An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins
X-ray radiolytic labeling uses broadband X-rays for in situ hydroxyl radical labeling to map protein interactions and conformation. High flux density beams are essential to overcome radical scavengers. However, conventional sample delivery environments, such as capillary flow, limit the use of a ful...
Autores principales: | , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9411504/ https://www.ncbi.nlm.nih.gov/pubmed/36008591 http://dx.doi.org/10.1038/s42003-022-03775-1 |
_version_ | 1784775283259211776 |
---|---|
author | Rosi, Matthew Russell, Brandon Kristensen, Line G. Farquhar, Erik R. Jain, Rohit Abel, Donald Sullivan, Michael Costello, Shawn M. Dominguez-Martin, Maria Agustina Chen, Yan Marqusee, Susan Petzold, Christopher J. Kerfeld, Cheryl A. DePonte, Daniel P. Farahmand, Farid Gupta, Sayan Ralston, Corie Y. |
author_facet | Rosi, Matthew Russell, Brandon Kristensen, Line G. Farquhar, Erik R. Jain, Rohit Abel, Donald Sullivan, Michael Costello, Shawn M. Dominguez-Martin, Maria Agustina Chen, Yan Marqusee, Susan Petzold, Christopher J. Kerfeld, Cheryl A. DePonte, Daniel P. Farahmand, Farid Gupta, Sayan Ralston, Corie Y. |
author_sort | Rosi, Matthew |
collection | PubMed |
description | X-ray radiolytic labeling uses broadband X-rays for in situ hydroxyl radical labeling to map protein interactions and conformation. High flux density beams are essential to overcome radical scavengers. However, conventional sample delivery environments, such as capillary flow, limit the use of a fully unattenuated focused broadband beam. An alternative is to use a liquid jet, and we have previously demonstrated that use of this form of sample delivery can increase labeling by tenfold at an unfocused X-ray source. Here we report the first use of a liquid jet for automated inline quantitative fluorescence dosage characterization and sample exposure at a high flux density microfocused synchrotron beamline. Our approach enables exposure times in single-digit microseconds while retaining a high level of side-chain labeling. This development significantly boosts the method’s overall effectiveness and efficiency, generates high-quality data, and opens up the arena for high throughput and ultrafast time-resolved in situ hydroxyl radical labeling. |
format | Online Article Text |
id | pubmed-9411504 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-94115042022-08-27 An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins Rosi, Matthew Russell, Brandon Kristensen, Line G. Farquhar, Erik R. Jain, Rohit Abel, Donald Sullivan, Michael Costello, Shawn M. Dominguez-Martin, Maria Agustina Chen, Yan Marqusee, Susan Petzold, Christopher J. Kerfeld, Cheryl A. DePonte, Daniel P. Farahmand, Farid Gupta, Sayan Ralston, Corie Y. Commun Biol Article X-ray radiolytic labeling uses broadband X-rays for in situ hydroxyl radical labeling to map protein interactions and conformation. High flux density beams are essential to overcome radical scavengers. However, conventional sample delivery environments, such as capillary flow, limit the use of a fully unattenuated focused broadband beam. An alternative is to use a liquid jet, and we have previously demonstrated that use of this form of sample delivery can increase labeling by tenfold at an unfocused X-ray source. Here we report the first use of a liquid jet for automated inline quantitative fluorescence dosage characterization and sample exposure at a high flux density microfocused synchrotron beamline. Our approach enables exposure times in single-digit microseconds while retaining a high level of side-chain labeling. This development significantly boosts the method’s overall effectiveness and efficiency, generates high-quality data, and opens up the arena for high throughput and ultrafast time-resolved in situ hydroxyl radical labeling. Nature Publishing Group UK 2022-08-25 /pmc/articles/PMC9411504/ /pubmed/36008591 http://dx.doi.org/10.1038/s42003-022-03775-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Rosi, Matthew Russell, Brandon Kristensen, Line G. Farquhar, Erik R. Jain, Rohit Abel, Donald Sullivan, Michael Costello, Shawn M. Dominguez-Martin, Maria Agustina Chen, Yan Marqusee, Susan Petzold, Christopher J. Kerfeld, Cheryl A. DePonte, Daniel P. Farahmand, Farid Gupta, Sayan Ralston, Corie Y. An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins |
title | An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins |
title_full | An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins |
title_fullStr | An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins |
title_full_unstemmed | An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins |
title_short | An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins |
title_sort | automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9411504/ https://www.ncbi.nlm.nih.gov/pubmed/36008591 http://dx.doi.org/10.1038/s42003-022-03775-1 |
work_keys_str_mv | AT rosimatthew anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT russellbrandon anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT kristensenlineg anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT farquharerikr anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT jainrohit anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT abeldonald anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT sullivanmichael anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT costelloshawnm anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT dominguezmartinmariaagustina anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT chenyan anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT marquseesusan anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT petzoldchristopherj anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT kerfeldcheryla anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT depontedanielp anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT farahmandfarid anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT guptasayan anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT ralstoncoriey anautomatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT rosimatthew automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT russellbrandon automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT kristensenlineg automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT farquharerikr automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT jainrohit automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT abeldonald automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT sullivanmichael automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT costelloshawnm automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT dominguezmartinmariaagustina automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT chenyan automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT marquseesusan automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT petzoldchristopherj automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT kerfeldcheryla automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT depontedanielp automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT farahmandfarid automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT guptasayan automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins AT ralstoncoriey automatedliquidjetforfluorescencedosimetryandmicrosecondradiolyticlabelingofproteins |