Cargando…
SRflow: Deep learning based super-resolution of 4D-flow MRI data
Exploiting 4D-flow magnetic resonance imaging (MRI) data to quantify hemodynamics requires an adequate spatio-temporal vector field resolution at a low noise level. To address this challenge, we provide a learned solution to super-resolve in vivo 4D-flow MRI data at a post-processing level. We propo...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9411720/ https://www.ncbi.nlm.nih.gov/pubmed/36034591 http://dx.doi.org/10.3389/frai.2022.928181 |
_version_ | 1784775332811767808 |
---|---|
author | Shit, Suprosanna Zimmermann, Judith Ezhov, Ivan Paetzold, Johannes C. Sanches, Augusto F. Pirkl, Carolin Menze, Bjoern H. |
author_facet | Shit, Suprosanna Zimmermann, Judith Ezhov, Ivan Paetzold, Johannes C. Sanches, Augusto F. Pirkl, Carolin Menze, Bjoern H. |
author_sort | Shit, Suprosanna |
collection | PubMed |
description | Exploiting 4D-flow magnetic resonance imaging (MRI) data to quantify hemodynamics requires an adequate spatio-temporal vector field resolution at a low noise level. To address this challenge, we provide a learned solution to super-resolve in vivo 4D-flow MRI data at a post-processing level. We propose a deep convolutional neural network (CNN) that learns the inter-scale relationship of the velocity vector map and leverages an efficient residual learning scheme to make it computationally feasible. A novel, direction-sensitive, and robust loss function is crucial to learning vector-field data. We present a detailed comparative study between the proposed super-resolution and the conventional cubic B-spline based vector-field super-resolution. Our method improves the peak-velocity to noise ratio of the flow field by 10 and 30% for in vivo cardiovascular and cerebrovascular data, respectively, for 4 × super-resolution over the state-of-the-art cubic B-spline. Significantly, our method offers 10x faster inference over the cubic B-spline. The proposed approach for super-resolution of 4D-flow data would potentially improve the subsequent calculation of hemodynamic quantities. |
format | Online Article Text |
id | pubmed-9411720 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94117202022-08-27 SRflow: Deep learning based super-resolution of 4D-flow MRI data Shit, Suprosanna Zimmermann, Judith Ezhov, Ivan Paetzold, Johannes C. Sanches, Augusto F. Pirkl, Carolin Menze, Bjoern H. Front Artif Intell Artificial Intelligence Exploiting 4D-flow magnetic resonance imaging (MRI) data to quantify hemodynamics requires an adequate spatio-temporal vector field resolution at a low noise level. To address this challenge, we provide a learned solution to super-resolve in vivo 4D-flow MRI data at a post-processing level. We propose a deep convolutional neural network (CNN) that learns the inter-scale relationship of the velocity vector map and leverages an efficient residual learning scheme to make it computationally feasible. A novel, direction-sensitive, and robust loss function is crucial to learning vector-field data. We present a detailed comparative study between the proposed super-resolution and the conventional cubic B-spline based vector-field super-resolution. Our method improves the peak-velocity to noise ratio of the flow field by 10 and 30% for in vivo cardiovascular and cerebrovascular data, respectively, for 4 × super-resolution over the state-of-the-art cubic B-spline. Significantly, our method offers 10x faster inference over the cubic B-spline. The proposed approach for super-resolution of 4D-flow data would potentially improve the subsequent calculation of hemodynamic quantities. Frontiers Media S.A. 2022-08-12 /pmc/articles/PMC9411720/ /pubmed/36034591 http://dx.doi.org/10.3389/frai.2022.928181 Text en Copyright © 2022 Shit, Zimmermann, Ezhov, Paetzold, Sanches, Pirkl and Menze. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Artificial Intelligence Shit, Suprosanna Zimmermann, Judith Ezhov, Ivan Paetzold, Johannes C. Sanches, Augusto F. Pirkl, Carolin Menze, Bjoern H. SRflow: Deep learning based super-resolution of 4D-flow MRI data |
title | SRflow: Deep learning based super-resolution of 4D-flow MRI data |
title_full | SRflow: Deep learning based super-resolution of 4D-flow MRI data |
title_fullStr | SRflow: Deep learning based super-resolution of 4D-flow MRI data |
title_full_unstemmed | SRflow: Deep learning based super-resolution of 4D-flow MRI data |
title_short | SRflow: Deep learning based super-resolution of 4D-flow MRI data |
title_sort | srflow: deep learning based super-resolution of 4d-flow mri data |
topic | Artificial Intelligence |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9411720/ https://www.ncbi.nlm.nih.gov/pubmed/36034591 http://dx.doi.org/10.3389/frai.2022.928181 |
work_keys_str_mv | AT shitsuprosanna srflowdeeplearningbasedsuperresolutionof4dflowmridata AT zimmermannjudith srflowdeeplearningbasedsuperresolutionof4dflowmridata AT ezhovivan srflowdeeplearningbasedsuperresolutionof4dflowmridata AT paetzoldjohannesc srflowdeeplearningbasedsuperresolutionof4dflowmridata AT sanchesaugustof srflowdeeplearningbasedsuperresolutionof4dflowmridata AT pirklcarolin srflowdeeplearningbasedsuperresolutionof4dflowmridata AT menzebjoernh srflowdeeplearningbasedsuperresolutionof4dflowmridata |