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How much BiGAN and CycleGAN-learned hidden features are effective for COVID-19 detection from CT images? A comparative study
Bidirectional generative adversarial networks (BiGANs) and cycle generative adversarial networks (CycleGANs) are two emerging machine learning models that, up to now, have been used as generative models, i.e., to generate output data sampled from a target probability distribution. However, these mod...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9411851/ https://www.ncbi.nlm.nih.gov/pubmed/36042937 http://dx.doi.org/10.1007/s11227-022-04775-y |
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author | Sarv Ahrabi, Sima Momenzadeh, Alireza Baccarelli, Enzo Scarpiniti, Michele Piazzo, Lorenzo |
author_facet | Sarv Ahrabi, Sima Momenzadeh, Alireza Baccarelli, Enzo Scarpiniti, Michele Piazzo, Lorenzo |
author_sort | Sarv Ahrabi, Sima |
collection | PubMed |
description | Bidirectional generative adversarial networks (BiGANs) and cycle generative adversarial networks (CycleGANs) are two emerging machine learning models that, up to now, have been used as generative models, i.e., to generate output data sampled from a target probability distribution. However, these models are also equipped with encoding modules, which, after weakly supervised training, could be, in principle, exploited for the extraction of hidden features from the input data. At the present time, how these extracted features could be effectively exploited for classification tasks is still an unexplored field. Hence, motivated by this consideration, in this paper, we develop and numerically test the performance of a novel inference engine that relies on the exploitation of BiGAN and CycleGAN-learned hidden features for the detection of COVID-19 disease from other lung diseases in computer tomography (CT) scans. In this respect, the main contributions of the paper are twofold. First, we develop a kernel density estimation (KDE)-based inference method, which, in the training phase, leverages the hidden features extracted by BiGANs and CycleGANs for estimating the (a priori unknown) probability density function (PDF) of the CT scans of COVID-19 patients and, then, in the inference phase, uses it as a target COVID-PDF for the detection of COVID diseases. As a second major contribution, we numerically evaluate and compare the classification accuracies of the implemented BiGAN and CycleGAN models against the ones of some state-of-the-art methods, which rely on the unsupervised training of convolutional autoencoders (CAEs) for attaining feature extraction. The performance comparisons are carried out by considering a spectrum of different training loss functions and distance metrics. The obtained classification accuracies of the proposed CycleGAN-based (resp., BiGAN-based) models outperform the corresponding ones of the considered benchmark CAE-based models of about 16% (resp., 14%). |
format | Online Article Text |
id | pubmed-9411851 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-94118512022-08-26 How much BiGAN and CycleGAN-learned hidden features are effective for COVID-19 detection from CT images? A comparative study Sarv Ahrabi, Sima Momenzadeh, Alireza Baccarelli, Enzo Scarpiniti, Michele Piazzo, Lorenzo J Supercomput Article Bidirectional generative adversarial networks (BiGANs) and cycle generative adversarial networks (CycleGANs) are two emerging machine learning models that, up to now, have been used as generative models, i.e., to generate output data sampled from a target probability distribution. However, these models are also equipped with encoding modules, which, after weakly supervised training, could be, in principle, exploited for the extraction of hidden features from the input data. At the present time, how these extracted features could be effectively exploited for classification tasks is still an unexplored field. Hence, motivated by this consideration, in this paper, we develop and numerically test the performance of a novel inference engine that relies on the exploitation of BiGAN and CycleGAN-learned hidden features for the detection of COVID-19 disease from other lung diseases in computer tomography (CT) scans. In this respect, the main contributions of the paper are twofold. First, we develop a kernel density estimation (KDE)-based inference method, which, in the training phase, leverages the hidden features extracted by BiGANs and CycleGANs for estimating the (a priori unknown) probability density function (PDF) of the CT scans of COVID-19 patients and, then, in the inference phase, uses it as a target COVID-PDF for the detection of COVID diseases. As a second major contribution, we numerically evaluate and compare the classification accuracies of the implemented BiGAN and CycleGAN models against the ones of some state-of-the-art methods, which rely on the unsupervised training of convolutional autoencoders (CAEs) for attaining feature extraction. The performance comparisons are carried out by considering a spectrum of different training loss functions and distance metrics. The obtained classification accuracies of the proposed CycleGAN-based (resp., BiGAN-based) models outperform the corresponding ones of the considered benchmark CAE-based models of about 16% (resp., 14%). Springer US 2022-08-26 2023 /pmc/articles/PMC9411851/ /pubmed/36042937 http://dx.doi.org/10.1007/s11227-022-04775-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Sarv Ahrabi, Sima Momenzadeh, Alireza Baccarelli, Enzo Scarpiniti, Michele Piazzo, Lorenzo How much BiGAN and CycleGAN-learned hidden features are effective for COVID-19 detection from CT images? A comparative study |
title | How much BiGAN and CycleGAN-learned hidden features are effective for COVID-19 detection from CT images? A comparative study |
title_full | How much BiGAN and CycleGAN-learned hidden features are effective for COVID-19 detection from CT images? A comparative study |
title_fullStr | How much BiGAN and CycleGAN-learned hidden features are effective for COVID-19 detection from CT images? A comparative study |
title_full_unstemmed | How much BiGAN and CycleGAN-learned hidden features are effective for COVID-19 detection from CT images? A comparative study |
title_short | How much BiGAN and CycleGAN-learned hidden features are effective for COVID-19 detection from CT images? A comparative study |
title_sort | how much bigan and cyclegan-learned hidden features are effective for covid-19 detection from ct images? a comparative study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9411851/ https://www.ncbi.nlm.nih.gov/pubmed/36042937 http://dx.doi.org/10.1007/s11227-022-04775-y |
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