Cargando…

Potential Biomarker Identification by RNA-Seq Analysis in Antibiotic-Related Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Pilot Study

One of the most severe forms of cutaneous adverse drug reactions is “drug reaction with eosinophilia and systemic symptoms” (DRESS), hence subsequent avoidance of the causal drug is imperative. However, attribution of drug culpability in DRESS is challenging and standard skin allergy tests are not r...

Descripción completa

Detalles Bibliográficos
Autores principales: Teo, Ying Xin, Haw, Wei Yann, Vallejo, Andreas, McGuire, Carolann, Woo, Jeongmin, Friedmann, Peter Simon, Polak, Marta Ewa, Ardern-Jones, Michael Roger
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9412178/
https://www.ncbi.nlm.nih.gov/pubmed/35703984
http://dx.doi.org/10.1093/toxsci/kfac062
_version_ 1784775430462504960
author Teo, Ying Xin
Haw, Wei Yann
Vallejo, Andreas
McGuire, Carolann
Woo, Jeongmin
Friedmann, Peter Simon
Polak, Marta Ewa
Ardern-Jones, Michael Roger
author_facet Teo, Ying Xin
Haw, Wei Yann
Vallejo, Andreas
McGuire, Carolann
Woo, Jeongmin
Friedmann, Peter Simon
Polak, Marta Ewa
Ardern-Jones, Michael Roger
author_sort Teo, Ying Xin
collection PubMed
description One of the most severe forms of cutaneous adverse drug reactions is “drug reaction with eosinophilia and systemic symptoms” (DRESS), hence subsequent avoidance of the causal drug is imperative. However, attribution of drug culpability in DRESS is challenging and standard skin allergy tests are not recommended due to patient safety reasons. Whilst incidence of DRESS is relatively low, between 1:1000 and 1:10 000 drug exposures, antibiotics are a commoner cause of DRESS and absence of confirmatory diagnostic test can result in unnecessary avoidance of efficacious treatment. We therefore sought to identify potential biomarkers for development of a diagnostic test in antibiotic-associated DRESS. Peripheral blood mononuclear cells from a “discovery” cohort (n = 5) challenged to causative antibiotic or control were analyzed for transcriptomic profile. A panel of genes was then tested in a validation cohort (n = 6) and compared with tolerant controls and other inflammatory conditions which can clinically mimic DRESS. A scoring system to identify presence of drug hypersensitivity was developed based on gene expression alterations of this panel. The DRESS transcriptomic panel identified antibiotic-DRESS cases in a validation cohort but was not altered in other inflammatory conditions. Machine learning or differential expression selection of a biomarker panel consisting of 6 genes (STAC, GPR183, CD40, CISH, CD4, and CCL8) showed high sensitivity and specificity (100% and 85.7%–100%, respectively) for identification of the culprit drug in these cohorts of antibiotic-associated DRESS. Further work is required to determine whether the same panel can be repeated for larger cohorts, different medications, and other T-cell-mediated drug hypersensitivity reactions.
format Online
Article
Text
id pubmed-9412178
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-94121782022-08-26 Potential Biomarker Identification by RNA-Seq Analysis in Antibiotic-Related Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Pilot Study Teo, Ying Xin Haw, Wei Yann Vallejo, Andreas McGuire, Carolann Woo, Jeongmin Friedmann, Peter Simon Polak, Marta Ewa Ardern-Jones, Michael Roger Toxicol Sci Biomarkers One of the most severe forms of cutaneous adverse drug reactions is “drug reaction with eosinophilia and systemic symptoms” (DRESS), hence subsequent avoidance of the causal drug is imperative. However, attribution of drug culpability in DRESS is challenging and standard skin allergy tests are not recommended due to patient safety reasons. Whilst incidence of DRESS is relatively low, between 1:1000 and 1:10 000 drug exposures, antibiotics are a commoner cause of DRESS and absence of confirmatory diagnostic test can result in unnecessary avoidance of efficacious treatment. We therefore sought to identify potential biomarkers for development of a diagnostic test in antibiotic-associated DRESS. Peripheral blood mononuclear cells from a “discovery” cohort (n = 5) challenged to causative antibiotic or control were analyzed for transcriptomic profile. A panel of genes was then tested in a validation cohort (n = 6) and compared with tolerant controls and other inflammatory conditions which can clinically mimic DRESS. A scoring system to identify presence of drug hypersensitivity was developed based on gene expression alterations of this panel. The DRESS transcriptomic panel identified antibiotic-DRESS cases in a validation cohort but was not altered in other inflammatory conditions. Machine learning or differential expression selection of a biomarker panel consisting of 6 genes (STAC, GPR183, CD40, CISH, CD4, and CCL8) showed high sensitivity and specificity (100% and 85.7%–100%, respectively) for identification of the culprit drug in these cohorts of antibiotic-associated DRESS. Further work is required to determine whether the same panel can be repeated for larger cohorts, different medications, and other T-cell-mediated drug hypersensitivity reactions. Oxford University Press 2022-06-15 /pmc/articles/PMC9412178/ /pubmed/35703984 http://dx.doi.org/10.1093/toxsci/kfac062 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the Society of Toxicology. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Biomarkers
Teo, Ying Xin
Haw, Wei Yann
Vallejo, Andreas
McGuire, Carolann
Woo, Jeongmin
Friedmann, Peter Simon
Polak, Marta Ewa
Ardern-Jones, Michael Roger
Potential Biomarker Identification by RNA-Seq Analysis in Antibiotic-Related Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Pilot Study
title Potential Biomarker Identification by RNA-Seq Analysis in Antibiotic-Related Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Pilot Study
title_full Potential Biomarker Identification by RNA-Seq Analysis in Antibiotic-Related Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Pilot Study
title_fullStr Potential Biomarker Identification by RNA-Seq Analysis in Antibiotic-Related Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Pilot Study
title_full_unstemmed Potential Biomarker Identification by RNA-Seq Analysis in Antibiotic-Related Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Pilot Study
title_short Potential Biomarker Identification by RNA-Seq Analysis in Antibiotic-Related Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS): A Pilot Study
title_sort potential biomarker identification by rna-seq analysis in antibiotic-related drug reaction with eosinophilia and systemic symptoms (dress): a pilot study
topic Biomarkers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9412178/
https://www.ncbi.nlm.nih.gov/pubmed/35703984
http://dx.doi.org/10.1093/toxsci/kfac062
work_keys_str_mv AT teoyingxin potentialbiomarkeridentificationbyrnaseqanalysisinantibioticrelateddrugreactionwitheosinophiliaandsystemicsymptomsdressapilotstudy
AT hawweiyann potentialbiomarkeridentificationbyrnaseqanalysisinantibioticrelateddrugreactionwitheosinophiliaandsystemicsymptomsdressapilotstudy
AT vallejoandreas potentialbiomarkeridentificationbyrnaseqanalysisinantibioticrelateddrugreactionwitheosinophiliaandsystemicsymptomsdressapilotstudy
AT mcguirecarolann potentialbiomarkeridentificationbyrnaseqanalysisinantibioticrelateddrugreactionwitheosinophiliaandsystemicsymptomsdressapilotstudy
AT woojeongmin potentialbiomarkeridentificationbyrnaseqanalysisinantibioticrelateddrugreactionwitheosinophiliaandsystemicsymptomsdressapilotstudy
AT friedmannpetersimon potentialbiomarkeridentificationbyrnaseqanalysisinantibioticrelateddrugreactionwitheosinophiliaandsystemicsymptomsdressapilotstudy
AT polakmartaewa potentialbiomarkeridentificationbyrnaseqanalysisinantibioticrelateddrugreactionwitheosinophiliaandsystemicsymptomsdressapilotstudy
AT ardernjonesmichaelroger potentialbiomarkeridentificationbyrnaseqanalysisinantibioticrelateddrugreactionwitheosinophiliaandsystemicsymptomsdressapilotstudy