Cargando…

Occupancy data improves parameter precision in spatial capture–recapture models

Population size is one of the basic demographic parameters for species management and conservation. Among different estimation methods, spatially explicit capture–recapture (SCR) models allow the estimation of population density in a framework that has been greatly developed in recent years. The use...

Descripción completa

Detalles Bibliográficos
Autores principales: Jiménez, José, Díaz‐Ruiz, Francisco, Monterroso, Pedro, Tobajas, Jorge, Ferreras, Pablo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9412271/
https://www.ncbi.nlm.nih.gov/pubmed/36052294
http://dx.doi.org/10.1002/ece3.9250
_version_ 1784775452905177088
author Jiménez, José
Díaz‐Ruiz, Francisco
Monterroso, Pedro
Tobajas, Jorge
Ferreras, Pablo
author_facet Jiménez, José
Díaz‐Ruiz, Francisco
Monterroso, Pedro
Tobajas, Jorge
Ferreras, Pablo
author_sort Jiménez, José
collection PubMed
description Population size is one of the basic demographic parameters for species management and conservation. Among different estimation methods, spatially explicit capture–recapture (SCR) models allow the estimation of population density in a framework that has been greatly developed in recent years. The use of automated detection devices, such as camera traps, has impressively extended SCR studies for individually identifiable species. However, its application to unmarked/partially marked species remains challenging, and no specific method has been widely used. We fitted an SCR‐integrated model (SCR‐IM) to stone marten Martes foina data, a species for which only some individuals are individually recognizable by natural marks, and estimate population size based on integration of three submodels: (1) individual capture histories from live capture and transponder tagging; (2) detection/nondetection or “occupancy” data using camera traps in a bigger area to extend the geographic scope of capture–recapture data; and (3) telemetry data from a set of tagged individuals. We estimated a stone marten density of 0.352 (SD: 0.081) individuals/km(2). We simulated four dilution scenarios of occupancy data to study the variation in the coefficient of variation in population size estimates. We also used simulations with similar characteristics as the stone marten case study, comparing the accuracy and precision obtained from SCR‐IM and SCR, to understand how submodels' integration affects the posterior distributions of estimated parameters. Based on our simulations, we found that population size estimates using SCR‐IM are more accurate and precise. In our stone marten case study, the SCR‐IM density estimation increased the precision by 37% when compared to the standard SCR model as regards to the coefficient of variation. This model has high potential to be used for species in which individual recognition by natural markings is not possible, therefore limiting the need to rely on invasive sampling procedures.
format Online
Article
Text
id pubmed-9412271
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-94122712022-08-31 Occupancy data improves parameter precision in spatial capture–recapture models Jiménez, José Díaz‐Ruiz, Francisco Monterroso, Pedro Tobajas, Jorge Ferreras, Pablo Ecol Evol Research Articles Population size is one of the basic demographic parameters for species management and conservation. Among different estimation methods, spatially explicit capture–recapture (SCR) models allow the estimation of population density in a framework that has been greatly developed in recent years. The use of automated detection devices, such as camera traps, has impressively extended SCR studies for individually identifiable species. However, its application to unmarked/partially marked species remains challenging, and no specific method has been widely used. We fitted an SCR‐integrated model (SCR‐IM) to stone marten Martes foina data, a species for which only some individuals are individually recognizable by natural marks, and estimate population size based on integration of three submodels: (1) individual capture histories from live capture and transponder tagging; (2) detection/nondetection or “occupancy” data using camera traps in a bigger area to extend the geographic scope of capture–recapture data; and (3) telemetry data from a set of tagged individuals. We estimated a stone marten density of 0.352 (SD: 0.081) individuals/km(2). We simulated four dilution scenarios of occupancy data to study the variation in the coefficient of variation in population size estimates. We also used simulations with similar characteristics as the stone marten case study, comparing the accuracy and precision obtained from SCR‐IM and SCR, to understand how submodels' integration affects the posterior distributions of estimated parameters. Based on our simulations, we found that population size estimates using SCR‐IM are more accurate and precise. In our stone marten case study, the SCR‐IM density estimation increased the precision by 37% when compared to the standard SCR model as regards to the coefficient of variation. This model has high potential to be used for species in which individual recognition by natural markings is not possible, therefore limiting the need to rely on invasive sampling procedures. John Wiley and Sons Inc. 2022-08-26 /pmc/articles/PMC9412271/ /pubmed/36052294 http://dx.doi.org/10.1002/ece3.9250 Text en © 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Jiménez, José
Díaz‐Ruiz, Francisco
Monterroso, Pedro
Tobajas, Jorge
Ferreras, Pablo
Occupancy data improves parameter precision in spatial capture–recapture models
title Occupancy data improves parameter precision in spatial capture–recapture models
title_full Occupancy data improves parameter precision in spatial capture–recapture models
title_fullStr Occupancy data improves parameter precision in spatial capture–recapture models
title_full_unstemmed Occupancy data improves parameter precision in spatial capture–recapture models
title_short Occupancy data improves parameter precision in spatial capture–recapture models
title_sort occupancy data improves parameter precision in spatial capture–recapture models
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9412271/
https://www.ncbi.nlm.nih.gov/pubmed/36052294
http://dx.doi.org/10.1002/ece3.9250
work_keys_str_mv AT jimenezjose occupancydataimprovesparameterprecisioninspatialcapturerecapturemodels
AT diazruizfrancisco occupancydataimprovesparameterprecisioninspatialcapturerecapturemodels
AT monterrosopedro occupancydataimprovesparameterprecisioninspatialcapturerecapturemodels
AT tobajasjorge occupancydataimprovesparameterprecisioninspatialcapturerecapturemodels
AT ferreraspablo occupancydataimprovesparameterprecisioninspatialcapturerecapturemodels