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On the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and COVID-19 infection severity

BACKGROUND: The tripartite motif containing (TRIM)-22 participates in innate immune responses and exhibits antiviral activities. The present study aimed to assess of the relationship between TRIM22 single-nucleotide polymorphisms and clinical parameters with the coronavirus disease 2019 (COVID-19) i...

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Autores principales: Raheem Juhi Al-Kaabi, Nidhal, Khameneh, Sepideh Chodari, Montazeri, Mohadeseh, Mardasi, Mahsa, Amroabadi, Jalal Mosayebi, Sakhaee, Fatemeh, Fateh, Abolfazl
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9412778/
https://www.ncbi.nlm.nih.gov/pubmed/36028902
http://dx.doi.org/10.1186/s40246-022-00394-z
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author Raheem Juhi Al-Kaabi, Nidhal
Khameneh, Sepideh Chodari
Montazeri, Mohadeseh
Mardasi, Mahsa
Amroabadi, Jalal Mosayebi
Sakhaee, Fatemeh
Fateh, Abolfazl
author_facet Raheem Juhi Al-Kaabi, Nidhal
Khameneh, Sepideh Chodari
Montazeri, Mohadeseh
Mardasi, Mahsa
Amroabadi, Jalal Mosayebi
Sakhaee, Fatemeh
Fateh, Abolfazl
author_sort Raheem Juhi Al-Kaabi, Nidhal
collection PubMed
description BACKGROUND: The tripartite motif containing (TRIM)-22 participates in innate immune responses and exhibits antiviral activities. The present study aimed to assess of the relationship between TRIM22 single-nucleotide polymorphisms and clinical parameters with the coronavirus disease 2019 (COVID-19) infection severity. METHODS: TRIM22 polymorphisms (rs7113258, rs7935564, and rs1063303) were genotyped using TaqMan polymerase chain reaction (PCR) assay in 495 dead and 497 improved severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-positive patients. RESULTS: In this study, the frequencies of TRIM22 rs1063303 GG, rs7935564 GG, and rs7113258 TT were significantly higher in dead patients than in improved patients, and higher viral load with low PCR Ct value was noticed in dead patients. The multivariate logistic regression analysis revealed that the lower levels of low-density lipoprotein (LDL), cholesterol, PCR Ct value, and lower 25-hydroxyvitamin D, and also higher levels of erythrocyte sedimentation rate (ESR), C-reactive protein (CRP), and TRIM22 rs1063303 GG, rs7113258 TT, and rs3824949 GG genotypes were related to the COVID-19 infection severity. CONCLUSION: Our finding proved the probable relationship between the COVID-19 infection severity with the genotypes of TRIM22 SNPs and clinical parameters. More research is required worldwide to show the association between the COVID-19 infection severity and host genetic factors.
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spelling pubmed-94127782022-08-26 On the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and COVID-19 infection severity Raheem Juhi Al-Kaabi, Nidhal Khameneh, Sepideh Chodari Montazeri, Mohadeseh Mardasi, Mahsa Amroabadi, Jalal Mosayebi Sakhaee, Fatemeh Fateh, Abolfazl Hum Genomics Research BACKGROUND: The tripartite motif containing (TRIM)-22 participates in innate immune responses and exhibits antiviral activities. The present study aimed to assess of the relationship between TRIM22 single-nucleotide polymorphisms and clinical parameters with the coronavirus disease 2019 (COVID-19) infection severity. METHODS: TRIM22 polymorphisms (rs7113258, rs7935564, and rs1063303) were genotyped using TaqMan polymerase chain reaction (PCR) assay in 495 dead and 497 improved severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-positive patients. RESULTS: In this study, the frequencies of TRIM22 rs1063303 GG, rs7935564 GG, and rs7113258 TT were significantly higher in dead patients than in improved patients, and higher viral load with low PCR Ct value was noticed in dead patients. The multivariate logistic regression analysis revealed that the lower levels of low-density lipoprotein (LDL), cholesterol, PCR Ct value, and lower 25-hydroxyvitamin D, and also higher levels of erythrocyte sedimentation rate (ESR), C-reactive protein (CRP), and TRIM22 rs1063303 GG, rs7113258 TT, and rs3824949 GG genotypes were related to the COVID-19 infection severity. CONCLUSION: Our finding proved the probable relationship between the COVID-19 infection severity with the genotypes of TRIM22 SNPs and clinical parameters. More research is required worldwide to show the association between the COVID-19 infection severity and host genetic factors. BioMed Central 2022-08-26 /pmc/articles/PMC9412778/ /pubmed/36028902 http://dx.doi.org/10.1186/s40246-022-00394-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Raheem Juhi Al-Kaabi, Nidhal
Khameneh, Sepideh Chodari
Montazeri, Mohadeseh
Mardasi, Mahsa
Amroabadi, Jalal Mosayebi
Sakhaee, Fatemeh
Fateh, Abolfazl
On the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and COVID-19 infection severity
title On the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and COVID-19 infection severity
title_full On the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and COVID-19 infection severity
title_fullStr On the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and COVID-19 infection severity
title_full_unstemmed On the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and COVID-19 infection severity
title_short On the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and COVID-19 infection severity
title_sort on the relationship between tripartite motif-containing 22 single-nucleotide polymorphisms and covid-19 infection severity
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9412778/
https://www.ncbi.nlm.nih.gov/pubmed/36028902
http://dx.doi.org/10.1186/s40246-022-00394-z
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