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Intersubunit Coupling Enables Fast CO(2)-Fixation by Reductive Carboxylases
[Image: see text] Enoyl-CoA carboxylases/reductases (ECRs) are some of the most efficient CO(2)-fixing enzymes described to date. However, the molecular mechanisms underlying the extraordinary catalytic activity of ECRs on the level of the protein assembly remain elusive. Here we used a combination...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9413435/ https://www.ncbi.nlm.nih.gov/pubmed/36032767 http://dx.doi.org/10.1021/acscentsci.2c00057 |
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author | DeMirci, Hasan Rao, Yashas Stoffel, Gabriele M. Vögeli, Bastian Schell, Kristina Gomez, Aharon Batyuk, Alexander Gati, Cornelius Sierra, Raymond G. Hunter, Mark S. Dao, E. Han Ciftci, Halil I. Hayes, Brandon Poitevin, Fredric Li, Po-Nan Kaur, Manat Tono, Kensuke Saez, David Adrian Deutsch, Samuel Yoshikuni, Yasuo Grubmüller, Helmut Erb, Tobias J. Vöhringer-Martinez, Esteban Wakatsuki, Soichi |
author_facet | DeMirci, Hasan Rao, Yashas Stoffel, Gabriele M. Vögeli, Bastian Schell, Kristina Gomez, Aharon Batyuk, Alexander Gati, Cornelius Sierra, Raymond G. Hunter, Mark S. Dao, E. Han Ciftci, Halil I. Hayes, Brandon Poitevin, Fredric Li, Po-Nan Kaur, Manat Tono, Kensuke Saez, David Adrian Deutsch, Samuel Yoshikuni, Yasuo Grubmüller, Helmut Erb, Tobias J. Vöhringer-Martinez, Esteban Wakatsuki, Soichi |
author_sort | DeMirci, Hasan |
collection | PubMed |
description | [Image: see text] Enoyl-CoA carboxylases/reductases (ECRs) are some of the most efficient CO(2)-fixing enzymes described to date. However, the molecular mechanisms underlying the extraordinary catalytic activity of ECRs on the level of the protein assembly remain elusive. Here we used a combination of ambient-temperature X-ray free electron laser (XFEL) and cryogenic synchrotron experiments to study the structural organization of the ECR from Kitasatospora setae. The K. setae ECR is a homotetramer that differentiates into a pair of dimers of open- and closed-form subunits in the catalytically active state. Using molecular dynamics simulations and structure-based mutagenesis, we show that catalysis is synchronized in the K. setae ECR across the pair of dimers. This conformational coupling of catalytic domains is conferred by individual amino acids to achieve high CO(2)-fixation rates. Our results provide unprecedented insights into the dynamic organization and synchronized inter- and intrasubunit communications of this remarkably efficient CO(2)-fixing enzyme during catalysis. |
format | Online Article Text |
id | pubmed-9413435 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-94134352022-08-27 Intersubunit Coupling Enables Fast CO(2)-Fixation by Reductive Carboxylases DeMirci, Hasan Rao, Yashas Stoffel, Gabriele M. Vögeli, Bastian Schell, Kristina Gomez, Aharon Batyuk, Alexander Gati, Cornelius Sierra, Raymond G. Hunter, Mark S. Dao, E. Han Ciftci, Halil I. Hayes, Brandon Poitevin, Fredric Li, Po-Nan Kaur, Manat Tono, Kensuke Saez, David Adrian Deutsch, Samuel Yoshikuni, Yasuo Grubmüller, Helmut Erb, Tobias J. Vöhringer-Martinez, Esteban Wakatsuki, Soichi ACS Cent Sci [Image: see text] Enoyl-CoA carboxylases/reductases (ECRs) are some of the most efficient CO(2)-fixing enzymes described to date. However, the molecular mechanisms underlying the extraordinary catalytic activity of ECRs on the level of the protein assembly remain elusive. Here we used a combination of ambient-temperature X-ray free electron laser (XFEL) and cryogenic synchrotron experiments to study the structural organization of the ECR from Kitasatospora setae. The K. setae ECR is a homotetramer that differentiates into a pair of dimers of open- and closed-form subunits in the catalytically active state. Using molecular dynamics simulations and structure-based mutagenesis, we show that catalysis is synchronized in the K. setae ECR across the pair of dimers. This conformational coupling of catalytic domains is conferred by individual amino acids to achieve high CO(2)-fixation rates. Our results provide unprecedented insights into the dynamic organization and synchronized inter- and intrasubunit communications of this remarkably efficient CO(2)-fixing enzyme during catalysis. American Chemical Society 2022-04-25 2022-08-24 /pmc/articles/PMC9413435/ /pubmed/36032767 http://dx.doi.org/10.1021/acscentsci.2c00057 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | DeMirci, Hasan Rao, Yashas Stoffel, Gabriele M. Vögeli, Bastian Schell, Kristina Gomez, Aharon Batyuk, Alexander Gati, Cornelius Sierra, Raymond G. Hunter, Mark S. Dao, E. Han Ciftci, Halil I. Hayes, Brandon Poitevin, Fredric Li, Po-Nan Kaur, Manat Tono, Kensuke Saez, David Adrian Deutsch, Samuel Yoshikuni, Yasuo Grubmüller, Helmut Erb, Tobias J. Vöhringer-Martinez, Esteban Wakatsuki, Soichi Intersubunit Coupling Enables Fast CO(2)-Fixation by Reductive Carboxylases |
title | Intersubunit Coupling Enables Fast CO(2)-Fixation
by Reductive Carboxylases |
title_full | Intersubunit Coupling Enables Fast CO(2)-Fixation
by Reductive Carboxylases |
title_fullStr | Intersubunit Coupling Enables Fast CO(2)-Fixation
by Reductive Carboxylases |
title_full_unstemmed | Intersubunit Coupling Enables Fast CO(2)-Fixation
by Reductive Carboxylases |
title_short | Intersubunit Coupling Enables Fast CO(2)-Fixation
by Reductive Carboxylases |
title_sort | intersubunit coupling enables fast co(2)-fixation
by reductive carboxylases |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9413435/ https://www.ncbi.nlm.nih.gov/pubmed/36032767 http://dx.doi.org/10.1021/acscentsci.2c00057 |
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